Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr16869g00002 ATGGCGAATCGTTGGTGGGCTGGGAATGTGGGAATGATAAGAGAACAAGAGTTGATGGATAGCAACAACAGTAACAACGTCAACGCCAACACTACTACTACTCCGACGAATAGCAGCAACAGCAACACTAACGCAAATACCAACACCACGGAGGAAGAGGTCAGCAGGGACAACGGCGAGGACCAGAACCCCGGCAGCCACGAAGGTTCGGAGCCGGGAAGCAGCGGGCGCAGGCCACGTGGCAGGCCTCCGGGCTCCAAGAACAAGGCCAAGCCGCCCATCGTCATTACCAAAGAAAGCCCCAACGCGCTTCGAAGCCACGTGCTGGAAATCGCCACCGGCACCGACGTCGCCGAGAGCATCGCGGCCTTCGCCAACCGCCGCCACCGCGGCGTCTCGGTTCTCAGCGGGAGTGGCATTGTCACCAACGTCACGCTCCGCCAGCCCGCTGCTCCCACCGGCGTCATCACGCTTCACGGAAGGTTCGAGATACTCTCCCTCTCCGGCGCCTTTTTGCCCTCTCCTTCTCCCCCTGGCGCCACCGGGCTCACCGTCTATTTGGCCGGCGGGCAGGGGCAAGTCGTTGGCGGCGCCGTGGCGGGGTCTCTGGTGGCCTCCGGGCCGGTGATGGTGATCGCCGCCACTTTCGCTAATGCTACTTATGAGAGGTTGCCGCTGGAGGATGAGCAAGGTGAGGAGGAAATGCAGGTGCAACAGCAACAACAATCTCAAGGGTGGTCGCCATCTCGGACTCCTAAGAGTTACACTGTTACATATAAGATTGTGGTTGAGTAA 795 0.5987 MANRWWAGNVGMIREQELMDSNNSNNVNANTTTTPTNSSNSNTNANTNTTEEEVSRDNGEDQNPGSHEGSEPGSSGRRPRGRPPGSKNKAKPPIVITKESPNALRSHVLEIATGTDVAESIAAFANRRHRGVSVLSGSGIVTNVTLRQPAAPTGVITLHGRFEILSLSGAFLPSPSPPGATGLTVYLAGGQGQVVGGAVAGSLVASGPVMVIAATFANATYERLPLEDEQGEEEMQVQQQQQSQGWSPSRTPKSYTVTYKIVVE 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr16869g00002 264 PIRSF ESCAROLA 14 260 IPR014476 GO:0003680
Mupr16869g00002 264 ProSiteProfiles PPC domain profile profile. 101 238 IPR005175 -
Mupr16869g00002 264 MobiDBLite consensus disorder prediction 20 95 - -
Mupr16869g00002 264 CDD DUF296 105 187 IPR005175 -
Mupr16869g00002 264 Gene3D - 104 245 - -
Mupr16869g00002 264 MobiDBLite consensus disorder prediction 235 252 - -
Mupr16869g00002 264 FunFam AT-hook motif nuclear-localized protein 104 232 - -
Mupr16869g00002 264 MobiDBLite consensus disorder prediction 228 252 - -
Mupr16869g00002 264 Pfam Plants and Prokaryotes Conserved (PCC) domain 105 217 IPR005175 -
Mupr16869g00002 264 MobiDBLite consensus disorder prediction 20 52 - -
Mupr16869g00002 264 SUPERFAMILY AF0104/ALDC/Ptd012-like 101 229 - -
Mupr16869g00002 264 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 39 244 IPR014476 GO:0003680
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr16869g00002 Mupr-Chr16869 5364 8566 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr16869g00002 77 250 AT-hook Motif Nuclear Localized (AHL) Family AT4G14465 70.115 2.26e-69 214