Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr16865g00001 ATGTCAGATGGATATGAGAGGAGTGAGGAACAGGCTGATGACACGTCGATGGGATCATCCCAGAAATGCTCATCCTTTGATTTGAATGAAGAAGCTAGTAGTGAAGATACCAATGATAAAGATGAGGAATACGCGGAAGCAAGGGATGAAGGTACTTCAACTAATAAAAGTAGCAGCATAACAAAGGAAGGAAATAGTAGTGAACGAAGAGGTGGTGTGAGACAATATGTTAGATCAAAGATGCCTCGGCTTCGCTGGACACCTGAACTTCATCTATCCTTTGTGCATGCTGTTGAAAGGCTTGGAGGTCAAGAGAGAGCAACACCCAAATTGGTGCTTCAGCTAATGAATGTGAGAGGACTCAGCATTGCTCATGTCAAGAGTCACTTGCAGATGTATCGAAGCAAGAAACTCGACGAGGCTGGGCAAGTATTAGGTCAAACATACAAATCCACCAATGAACTTGGTCGTATTTCTCATGTAGCCCATCAGTCTATGAATCCTCGTCAACATTTTAAGATGGGAAATGGAGGAATTATTCTAGCAAGTGATTACAACGACCAGAGTTATTTCCATGGTCTCGTGCATCCCTCCTCCCTATCACATTCACATTCAAAAGCCACCGATTCAAGGCACCAACAATGGTACTTCAATAATCATCAACCTTTTAGAAGACCAAGTTACTTCAGCAACGATGTTGTCTCCTCAACAGCCTTACAAACGCAAGGAAGATCATTATCTTCAAACCAAATTCAACTAATGGATGCTACCAGCATTACACCCATGAGACCAAGCCAATTTCTTGAAGAGAAAAAGTGGCCTCCATTAGAAATTATGAGCAACCATCTCTGGAAGAAAAGGTTACCTTCCAATATTACTTCTAATACTGGGTCTCATGATCAATTTGTTGTACATCAATTTGGCACCACTCTGGCATCTCTTAGATCAAGTGAGTTGAACTTTGGGAACAACACAAGAATCGGGGAACATCTATCAAACTCCGACGAGCATCGCAACTATTCCAACAGTTTAAAGCTAGAATTTGAGCCTCCATTTCGGATTAAGTCTTTAAAATTTTAA 1080 0.413 MSDGYERSEEQADDTSMGSSQKCSSFDLNEEASSEDTNDKDEEYAEARDEGTSTNKSSSITKEGNSSERRGGVRQYVRSKMPRLRWTPELHLSFVHAVERLGGQERATPKLVLQLMNVRGLSIAHVKSHLQMYRSKKLDEAGQVLGQTYKSTNELGRISHVAHQSMNPRQHFKMGNGGIILASDYNDQSYFHGLVHPSSLSHSHSKATDSRHQQWYFNNHQPFRRPSYFSNDVVSSTALQTQGRSLSSNQIQLMDATSITPMRPSQFLEEKKWPPLEIMSNHLWKKRLPSNITSNTGSHDQFVVHQFGTTLASLRSSELNFGNNTRIGEHLSNSDEHRNYSNSLKLEFEPPFRIKSLKF 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr16865g00001 359 MobiDBLite consensus disorder prediction 51 66 - -
Mupr16865g00001 359 MobiDBLite consensus disorder prediction 14 31 - -
Mupr16865g00001 359 SUPERFAMILY Homeodomain-like 80 136 IPR009057 -
Mupr16865g00001 359 Pfam Myb-like DNA-binding domain 84 134 IPR001005 -
Mupr16865g00001 359 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 78 138 IPR017930 -
Mupr16865g00001 359 NCBIfam myb-like DNA-binding domain, SHAQKYF class 82 137 IPR006447 GO:0003677
Mupr16865g00001 359 MobiDBLite consensus disorder prediction 1 76 - -
Mupr16865g00001 359 FunFam Myb family transcription factor 80 138 - -
Mupr16865g00001 359 Gene3D - 81 138 - -
Mupr16865g00001 359 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 61 203 IPR046955 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr16865g00001 Mupr-Chr16865 7897 12019 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr16865g00001 73 141 G2-like Transcription Factor Family AT2G42660 79.710 3.64e-34 125
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Mupr16865g00001 Myb_DNA-binding 2.4e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr16865g00001 - - gmx:100808625 621.698