Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr1685g00003 ATGGGAAGTGAACACGAAGAGGATCTGAAGGATGAGAAGAATCCCCGCCCCCTCGACGAGGATGACATCGCCCTCCTCAAAACCTATGGTTTGGGGCCTTATTCCACAAGCATAAAAAAGGTGGAGAAGGAAATAAAAGACATGGCAAAGAAAGTCAATGATTTATGCGGTATCAAGGAGTCTGATACTGGTTTGGCTGCACCAAGCCAGTGGGATCTTGTTTCTGATAAACAAATGATGCAGGAGGAGCAACCTCTTCAGGTCGTAGCAAGGTGCACAAAGATCATAAATCCAAACTCAGAAGATGCCAAATATGTTATCAATGTGAAGCAGATTGCAAAGTTTGTCGTTGGGCTGGGTGACAAAGTTTCACCCACTGACATAGAAGAAGGGATGCGTGTTGGGGTTGATAGGAACAAATATCAGATTCAAATTCCATTGCCTCCAAAAATTGACCCAAGTGTTACCATGATGACAGTTGAAGAGAAGCCTGATGTGACATATAATGATGTTGGTGGTTGTAAGGAGCAGATTGAAAAGATGCGAGAAGTTGTTGAGCTTCCCATGCTCCACCCAGAGAAATTTGTAAAGTTAGGAATTGATCCTCCAAAGGGTGTTCTTTGCTATGGTCCACCAGGGACTGGCAAAACACTTTTGGCTAGGGCTGTGGCTAATAGAACTGATGCTTGTTTTATACGAGTTATTGGAAGTGAGCTAGTTCAGAAATATGTTGGTGAGGGTGCCCGAATGGTTCGGGAACTATTTCAGATGGCCCGTTCAAAGAAGGCATGCATTGTGTTTTTCGATGAAGTTGATGCAATCGGAGGTGCACGGTTTGATGATGGTGTTGGTGGTGATAATGAGGTTCAGCGCACTATGCTTGAAATTGTGAATCAGCTTGATGGGTTTGATGCCCGTGGAAACATCAAAGTCTTGATGGCAACTAACAGGCCCGACACTCTAGATCCAGCACTACTACGGCCTGGACGATTGGACCGTAAAGTTGAATTTGGCCTTCCTGATTTAGAGAGTAGGACTCAGATATTCAAGATACACACAAGAACCATGAACTGTGAAAGGGATATCCGCTTTGAACTATTAGCTCGGCTTTGCCCAAATTCTACTGGAGCTGATATAAGGAGCGTTTGCACTGAAGCTGGTATGTATGCTATTCGAGCCCGAAGGAAGACTGTGACAGAGAAAGACTTCCTTGATGCAGTTAATAAAGTCATCAAAGGATACCAGAAGTTCAGTGCAACTCCCAAGTACATGGTCTACAACTGA 1284 0.4424 MGSEHEEDLKDEKNPRPLDEDDIALLKTYGLGPYSTSIKKVEKEIKDMAKKVNDLCGIKESDTGLAAPSQWDLVSDKQMMQEEQPLQVVARCTKIINPNSEDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMYAIRARRKTVTEKDFLDAVNKVIKGYQKFSATPKYMVYN 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr1685g00003 427 FunFam 26S protease regulatory subunit 7 159 338 - -
Mupr1685g00003 427 MobiDBLite consensus disorder prediction 1 20 - -
Mupr1685g00003 427 ProSitePatterns AAA-protein family signature. 309 327 IPR003960 GO:0005524|GO:0016887
Mupr1685g00003 427 Gene3D - 159 338 IPR027417 -
Mupr1685g00003 427 PANTHER 26S PROTEASOME REGULATORY SUBUNIT 9 413 - -
Mupr1685g00003 427 SMART AAA_5 202 341 IPR003593 GO:0016887
Mupr1685g00003 427 CDD RecA-like_PAN_like 167 337 - -
Mupr1685g00003 427 Gene3D - 340 421 - -
Mupr1685g00003 427 FunFam 26S protease regulatory subunit 7 33 158 - -
Mupr1685g00003 427 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 164 417 IPR027417 -
Mupr1685g00003 427 Pfam AAA+ lid domain 361 404 IPR041569 -
Mupr1685g00003 427 Gene3D - 31 158 IPR012340 -
Mupr1685g00003 427 Pfam ATPase family associated with various cellular activities (AAA) 206 338 IPR003959 GO:0005524|GO:0016887
Mupr1685g00003 427 FunFam 26S protease regulatory subunit 7 340 411 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr1685g00003 Mupr-Chr1685 28576 32006 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr1685g00003 171 392 Calmodulin-binding Proteins AT3G56690 37.220 1.28e-41 155
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr1685g00003 K03061 - gmx:100808239 845.114