Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr16854g00001 ATGGGTGTATCCCAAAAATGGTTTAGAATTTTTCGGGGGAGATTCCTCAGATCATCCAACAATGACATCATTCTCCCCCGCACAAGTATTTGCACTAACCAAAGCCAAGAAGCCATACTTAGGAATGAAGACTTCAATTTGCCAACACCAATAATTTCTCCAATCACCAAGGAAGATGTTGCGGCAACTAAGATCCAAGCTTATTTCCGGGGACATCTTGCAAGACGAGCATATAGGGCTTTAAAAAGCCTGGTAAAGCTGCAAGCATTGGTTCGTGGGGTGTGGGTGAGGAAACAATCACGTATAGCGATGCAGTGTATGCACGCACTTGTGCGATTACAAGTCAGGGTTCGGGCAAGGCAACTACTTGGTACCTTTGATAAGGAATCACTAACTAATTTACAAAATGTTTAG 414 0.4324 MGVSQKWFRIFRGRFLRSSNNDIILPRTSICTNQSQEAILRNEDFNLPTPIISPITKEDVAATKIQAYFRGHLARRAYRALKSLVKLQALVRGVWVRKQSRIAMQCMHALVRLQVRVRARQLLGTFDKESLTNLQNV 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr16854g00001 137 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 59 102 IPR027417 -
Mupr16854g00001 137 Pfam IQ calmodulin-binding motif 61 79 IPR000048 GO:0005515
Mupr16854g00001 137 Pfam IQ calmodulin-binding motif 82 99 IPR000048 GO:0005515
Mupr16854g00001 137 Gene3D - 56 106 - -
Mupr16854g00001 137 ProSiteProfiles IQ motif profile. 58 86 IPR000048 GO:0005515
Mupr16854g00001 137 PANTHER IQ-DOMAIN 5-RELATED 35 122 - -
Mupr16854g00001 137 ProSiteProfiles IQ motif profile. 82 109 IPR000048 GO:0005515
Mupr16854g00001 137 SMART iq_5 80 101 IPR000048 GO:0005515
Mupr16854g00001 137 SMART iq_5 57 79 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr16854g00001 Mupr-Chr16854 4446 4997 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr16854g00001 1 124 IQD Protein Family AT3G51380 51.613 4.37e-35 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr16854g00001 - - gmx:100788207 209.92