Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr16839g00001 ATGCAGCTTCTCCACTCCGACGAAGCCGCCACCGAGCGCCTCGACTCTCCGGACAATCCCGATGAGCCCAACGCCGCCTCCGATTCTCTCGACTCCGGAAATGACGACGGCGCGGCTCTCGACGTCACCGGAAAGAGCGTCGAGTTTCCGGAGGCGGAGAACGCCGACGACTCCGTTGAGAGCCTCTACATGTACAAGAACGTCTACAGTCTCATTCCGAAGTCGGTTTCGCGCCTCTCGCGGTTGCGAACGCTGAAGTTCTTCGGAAATGAGATTAACCTGTTCTCTCCTGAGTTCGGGAACTTGATGGCGTTGGAGTGCTTGCAGATTAAGATATCCTCGCCTGGGATTGGAGGCTTGCCGTTGCACACGCTCAAGGGTTTGAAGGAGCTCGAACTTTCCAAAGGCCCTCCCAGACCTTCGGCTTTTCCCATTCTAACCGAAATTTCAGGTCTTAAGTGTTTGACCAAACTTTGCATTCGTCATTTCTCTATACGATACCTTCCTCCGGAAATTGGATGCTTGAAGAACCTGGAGTATCTTGATCTTTCGTTCAACAAAATGAAGACGTTGCCGGTGGAGATTAGTTATTTGGAAAGCTTGAGATTAATGAAAGTTGCAAATAATAAGTTGGTGGAACTGCCGTCAGCCATGAGCTCACTGTCAAGGTTGGAAAGTTTGGACCTGTCGAATAACAGGTTGACTTCGTTAGGGTCTCTTGAACTTGCCTCAATGCAAAGGCTTCAGAAGTTAAATCTTCAGTACAACAAGCTGCTCGGAAGTTTTCAAATTCCTTCATGGATATGTTGTAATATGGAGGGAAATGATGGAACTAGATGTAAAGATGATTGCAGCAGTTCTTCTGTTGAAATGGATCTCTATGAAAGCAGCTTTCAGGAAAATGATGAAACCCTTTCTCACAGTCCTCATAATACCTCATCAAGCATGTTAACAAGCTCCTCATCTAGCAGCAGATGTTTTGCAGACCAGAAGTCAGGTAAACGGTGGAAACGGCGACATTATTTACAACAGAAAGCTCGTCAAGAACGCTTGAACAGCAGTAGGAAGTGGAAAGCTTTAGATCATGACCAGTTGTTGAGCAAGAAGATTCACAGAATTTCTGAACCAGGAAATCATGACAGGCTTTCTTCTGAAAGTTGTGCAGAAATTGTATCAGAGAATGAGAGGAGCCTGGATGATAATAATAAAAGAATATTATCTGAACGAGCAGTAAATGACAATGTAATTGATAATGTTAACAATGATGAAGTAATTATTGAAAAGCACTTTTCTCAGGAAGATTGCTGCACTACCGAAAGTGAAGATGAAAAAGATGCATCCTTATGCTCCTTAGAGAACAGGCAAAGTGAACAAGACGAAGCATCATGTTTAGAACTTTTGAAGGTTGTTTCTAAATCAAAGAGACATTTGGATCGGGATCTTGATAATCCTAAACCATGCAAGTCTAGAAAATCAATTAGTGCTAGTTCATTATTGTCTTGCAAGTACAGCAAGATCTCATTTTGCGGCATTGAAGACCATCTATCAGATGGCTTTTATGATGCAGGACGAGATAGGCCATTTATGCCTCTTGAGAGTTATGAGCAAAATCAGTTTCTTGCTTCTCGAGAAGTCATCCTTTTAGACAGAAAAAGGGATGAAGAGTTGGATGCTGTTATGCTAGCTGCTCAGGCATTGGTCTGTAGTTTGAAGCAGTTAAATGGTTTAAACCGACATGGGAAGGATGTGGTTGATAACCTGCTGATGGCATCGCTGCTTGCATTCTTTGTATCGGATCATTTTGGGGGCAGTGATAGAGGTGCTATTGTAGAAAGGACACGGAAATCTGTGTCTGGTTCAAACTATAATAAGCCTTTTGTCTGTACATGCTCAGCTGGAAGCAGCACCAGTGTAAGTGCTTCCACTGAACCAGTTGTAAACACCATAGAAGATATCACTCTTTCTAAGATGTGTGAAAAATCTCTCGACTCTTTAAAAAAAAGGCGAAATTCAATCATAGTTCCAATTGGCTCTGTGCAGTATGGTGTATGTAGACATAGAGCTCTGCTTTTTAAGTATTTATGTGATCACATGGAACCACCAGTTCCTTGTGAGCTTGTCAGGGGTTACCTGGATTTTTCACCACATGCCTGGAATATTATTCTGATTAAGAGGGGTGCTACATGGGTTCGAATGCTGATTGATGCTTGTCGACCTCATGATATAAGAGAAGAGAAAGATCCTGAATACTTTTGCAGGTATGTACCTCTTAATCGAACCACAATCCCTCTATCATCTAGAGGAAGTTCAGGTCCTGATTGTTCTTTTCCATCTCTCAATACTTGTGATGAACTTGAGACAAAGGCTTCAACTACTTTAGTTAAATGCAAATTTGGATCAGTTGAGGCTGCAGCTAAGGTGCGCACTTTGGAAGAGCAGGGGAGTTCGGCAGACAAAATAAAAATTTTTGAATATAATTGTTTGGGAGAAATTAGAATTCTTGGTGCTTTAAAACACCCCTGCATAGTGGAAATGTATGGACACCAAATGTCATGTCAATGGTCTGTCTCTGCTGATGGTAATCCTGAACACCGCATATTAAGATCTGCAATTTTTATGGAGTATGTGGAAGGGGGCTCCTTAAAAAACTATCTGGAGAAGCTGTCAGAAGCTGGTCAAAAGCATGTTCCTGTAGAATTGGCTTTGTATATTGCCAAAGATGTCTCGTGTGCTTTGTCAGAGCTGCATTCAAGGCACATAATTCATCGTGACATAAAAAGTGAAAACATTCTGTTTGATTTAGATAAGAAGAGAGATGATGGAACTCCCACTGTGAAGCTCTGTGATTTTGATAGTGCAGTGCCACTAAGATCAACTTTACATGCATGTTGTATTGCTCATGTGGGAACACCTCCTCCTTGTGTATGTGTTGGAACACCTCGATGGATGGCTCCAGAGGAAGCTGACATTTGGTCGTATGGGTGTTTACTTTTGGAGATGCTGACTTTGCAAATTCCATATTCCGGATTTTCTGATTCACACTTCCTTGATAGTCTGCAGATGGGTAAACGACCACAATTAACTGATGAGCTGGAGGTATTGAGTTCAATGAATGAACCCACAATGATTCCATCTAGCGAAGAGCTGGAAAAATCAGATGCTGAGGTAGACATGTTGAAGTTCCTTGTTGATTTGTTCCATAGGTGCGTGGAAGAAAATCCAAACAAACGTCCTACAGCTGAAGAAATCCATAAAATGCTGCTTGCACACACAGGTCGCTTACAAGTTTAA 3291 0.4242 MQLLHSDEAATERLDSPDNPDEPNAASDSLDSGNDDGAALDVTGKSVEFPEAENADDSVESLYMYKNVYSLIPKSVSRLSRLRTLKFFGNEINLFSPEFGNLMALECLQIKISSPGIGGLPLHTLKGLKELELSKGPPRPSAFPILTEISGLKCLTKLCIRHFSIRYLPPEIGCLKNLEYLDLSFNKMKTLPVEISYLESLRLMKVANNKLVELPSAMSSLSRLESLDLSNNRLTSLGSLELASMQRLQKLNLQYNKLLGSFQIPSWICCNMEGNDGTRCKDDCSSSSVEMDLYESSFQENDETLSHSPHNTSSSMLTSSSSSSRCFADQKSGKRWKRRHYLQQKARQERLNSSRKWKALDHDQLLSKKIHRISEPGNHDRLSSESCAEIVSENERSLDDNNKRILSERAVNDNVIDNVNNDEVIIEKHFSQEDCCTTESEDEKDASLCSLENRQSEQDEASCLELLKVVSKSKRHLDRDLDNPKPCKSRKSISASSLLSCKYSKISFCGIEDHLSDGFYDAGRDRPFMPLESYEQNQFLASREVILLDRKRDEELDAVMLAAQALVCSLKQLNGLNRHGKDVVDNLLMASLLAFFVSDHFGGSDRGAIVERTRKSVSGSNYNKPFVCTCSAGSSTSVSASTEPVVNTIEDITLSKMCEKSLDSLKKRRNSIIVPIGSVQYGVCRHRALLFKYLCDHMEPPVPCELVRGYLDFSPHAWNIILIKRGATWVRMLIDACRPHDIREEKDPEYFCRYVPLNRTTIPLSSRGSSGPDCSFPSLNTCDELETKASTTLVKCKFGSVEAAAKVRTLEEQGSSADKIKIFEYNCLGEIRILGALKHPCIVEMYGHQMSCQWSVSADGNPEHRILRSAIFMEYVEGGSLKNYLEKLSEAGQKHVPVELALYIAKDVSCALSELHSRHIIHRDIKSENILFDLDKKRDDGTPTVKLCDFDSAVPLRSTLHACCIAHVGTPPPCVCVGTPRWMAPEEADIWSYGCLLLEMLTLQIPYSGFSDSHFLDSLQMGKRPQLTDELEVLSSMNEPTMIPSSEELEKSDAEVDMLKFLVDLFHRCVEENPNKRPTAEEIHKMLLAHTGRLQV 1096
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr16839g00001 1096 Pfam Leucine rich repeat 201 258 IPR001611 GO:0005515
Mupr16839g00001 1096 Pfam Ethylene-responsive protein kinase Le-CTR1 652 725 - -
Mupr16839g00001 1096 SUPERFAMILY Cysteine proteinases 680 738 IPR038765 -
Mupr16839g00001 1096 Gene3D Transferase(Phosphotransferase) domain 1 777 1093 - -
Mupr16839g00001 1096 SMART LRR_typ_2 79 101 IPR003591 -
Mupr16839g00001 1096 SMART LRR_typ_2 245 271 IPR003591 -
Mupr16839g00001 1096 SMART LRR_typ_2 221 244 IPR003591 -
Mupr16839g00001 1096 SMART LRR_typ_2 175 198 IPR003591 -
Mupr16839g00001 1096 ProSiteProfiles Protein kinase domain profile. 787 1087 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr16839g00001 1096 SMART serkin_6 779 1089 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr16839g00001 1096 FunFam Leucine-rich repeat protein kinase family protein 48 290 - -
Mupr16839g00001 1096 SMART LRR_sd22_2 221 242 - -
Mupr16839g00001 1096 SMART LRR_sd22_2 175 200 - -
Mupr16839g00001 1096 MobiDBLite consensus disorder prediction 1 41 - -
Mupr16839g00001 1096 ProSiteProfiles Leucine-rich repeat profile. 223 244 IPR001611 GO:0005515
Mupr16839g00001 1096 SUPERFAMILY RNI-like 59 261 - -
Mupr16839g00001 1096 PANTHER SERINE/THREONINE-PROTEIN KINASE SBK1 105 1091 - -
Mupr16839g00001 1096 ProSitePatterns Serine/Threonine protein kinases active-site signature. 920 932 IPR008271 GO:0004672|GO:0006468
Mupr16839g00001 1096 PRINTS Leucine-rich repeat signature 221 234 - -
Mupr16839g00001 1096 PRINTS Leucine-rich repeat signature 178 191 - -
Mupr16839g00001 1096 ProSiteProfiles Leucine-rich repeat profile. 177 198 IPR001611 GO:0005515
Mupr16839g00001 1096 SUPERFAMILY Protein kinase-like (PK-like) 800 1085 IPR011009 -
Mupr16839g00001 1096 Pfam Protein kinase domain 816 1085 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr16839g00001 1096 SMART LRR_bac_2 175 194 - -
Mupr16839g00001 1096 SMART LRR_bac_2 221 240 - -
Mupr16839g00001 1096 SMART LRR_bac_2 198 217 - -
Mupr16839g00001 1096 MobiDBLite consensus disorder prediction 298 329 - -
Mupr16839g00001 1096 Gene3D Ribonuclease Inhibitor 43 285 IPR032675 -
Mupr16839g00001 1096 FunFam Leucine-rich repeat protein kinase family protein 825 1093 - -
Mupr16839g00001 1096 MobiDBLite consensus disorder prediction 298 332 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr16839g00001 Mupr-Chr16839 6228 13389 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr16839g00001 779 1089 MAP Kinase Kinase Kinase AT2G24360 27.187 3.20e-21 95.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-2 Mupr16839g00001 Pkinase 3.3e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr16839g00001 - - gmx:100819959 1873.21