LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mupr16833g00001	ATGGGTCTCTGCACCCCCTCCTTCTTCTTCCTCACCTTCTTGTTCTTCTTCTTCTTCCTCAATCTTCAACCCTCTCTTTCCCAACAACAACTCTCATCCTTCAACATCTCACACTCTCCATGGATGCCAACACAGAAGATAACCCTTCTCTCTCCCAACAGAAACTTCACTGCAGGCTTCTTCTCCCTACCAAACTCCAACCTCTTCACCTTCTCAATTTGGTACTCCAAAATCCCTCAAAGTGCAAACCCTCTTGTGTGGAGTGCCACCACCCAAGTGAACAGTTCTGGCTCCCTTCTCATCACCTCAAAAGGTGAACTTCTCCTCAACGGTTCACCCTTTCAAGGTGCCAGTGCCACCAATGGTACCTCACTTGTTCTTCAAAACGATGGAAGCTTGGTTTTTGGGACGTGGAGCAGCTTCGAGAACCCCACCAACACCATTTTGCCCAACCAGAACTTCAGCACTGGGAATGGGATTGAGCTTCAGTCCAGCAATGGGAAATTCAGGTTCATAAAGTCCCAGTTTCTGGTCCTCAACTCCACCTCTGCTCAATACTACAGCACTCCAAACAAATTGCTGAGCATGGATGACTTAGGGAAAATGAGCATGGAGGGTAACTCTTTCCTCACTTCAGACTATGGTGACACCAGGTTCAGGAAACTGGTCCTTGATGATGATGGGAATCTCAGGATCTACAGCTTCTACCCTGAGCAGAATTCCCAGTGGATTGAGGTTTGGAAAGGGGTGTGGGAGATGTGCCAAATCAAAGGCAAGTGTGGACCTAATTCAATTTGTGTTCCCAGAGCTGATTTGAACACTTCTACTTATTGTGTTTGCCCATCTGGGTTCAGCCAGGCAGATGGGCCTGAAGAGGGTTGCACAAGGAGAATCCCTCTTTCCCAACACACCCAGTTTTTGAAGCTGGATTATGTGAACTACACCAGTGATGGCAGCATGTACCAGATCAAAGCTGAGAATTTCACAATCTGTGAGTCAAGCTGCTCAGGAGACAGAACCTGTCTTGGGTTTGGCTTCAAGTATGATGGATCTGGGTACTGTGTATTGCTAAAAGGGTCACAGCTTCTTTATGGGTACTGGTCACCAGGCACTGAGACTGCCTTGTTTGTGAGGGTTGACAAATCTGAGTCAACACCCTCCAACTTCATTGGCATGACTGAGGTGATGCAAACCACATGCCCTGTCAACATAAGCCTCCCCTTGCCTCCAAAGGACTCAAACACCACTGCAAGAAACATTGCCATAATATGCACCCTCTTTGCTGCAGAACTCATAGCTGGGGTGGCCTTCTTCTGGTCCTTCCTCAAGAGGTACATAAAGTATAGGGACATGGCCACCACATTAGGCCTTGAGCTTCTCCCTGCTGGGGGCCCCAAGAGGTTCACCTTCTCAGAAATCAAGGCTGCCACCAATGATTTCTCCAACCTCATAGGCAAAGGAGGCTTTGGAGATGTATACAAAGGGGAGCTACCAGACCACAGGGTGGTGGCTGTGAAGTGCCTAAAAAATGTCACAGGAGGAGATAATGAGTTCTGGGCAGAAGTCAAAATCATTGCCAGAATGCACCACCTCAACTTGGTCAGGTTATGGGGCTTCTGTGCTGAGAAAGGCCAAAGGATACTTGTCTATGAACACGTCCCTGCTGGCTCATTGGACAAGTACCTCTTCAGTGTCAAGTCCCATAATAATAATATCCATCTGAAAGACCAATCAAGTCCAAGCCCACAACAAAGGCCTGCTTTGGATTGGAACATAAGGTACAGAATTGCCCTTGGTGTGGCAAGGGCTATTGCTTACTTGCATGAGGAGTGTTTGGAGTGGGTTTTGCACTGTGACATCAAGCCTGAGAACATTCTACTGGGTGATGATTTTTGTCCCAAGATTTCAGATTTTGGGCTGGCCAAGTTGAGGAAAAAAGAGGACATGGTAACCATGTCAAGGAGGAGGGGGACTCCAGGGTACATGGCACCAGAATGGATAACTGCAGATCCAATAACTTCCAAGGCTGATGTGTACAGCTTTGGTATGGTGCTGTTGGAGCTTGTAAGTGGGATTAGGAACTTTGAGATCCAAGACTCAGTGGTGAGGAGTGAGGAGTGGTACTTCCCTGGTTGGGCCTTTGATAAGATGTTTAAGGAGATGAGAGTGGAGGACATTCTTGATGCCCAGATTAGGGATGCTTATGATAGTAGGGCCCACTTTGACATGGTTAATAGGATGGTCAAGACTGCCATGTGGTGCCTCCAAGATAGGCCCGAGTTGAGGCCCACTATGGGCAAGGTGGCCAAGATGTTGGAAGGGACTGTGGAGATCATTGACCCCAAGAAGCCCACTGTTTTCTTCCTTGGGGACGACTAG	2379	0.48	MGLCTPSFFFLTFLFFFFFLNLQPSLSQQQLSSFNISHSPWMPTQKITLLSPNRNFTAGFFSLPNSNLFTFSIWYSKIPQSANPLVWSATTQVNSSGSLLITSKGELLLNGSPFQGASATNGTSLVLQNDGSLVFGTWSSFENPTNTILPNQNFSTGNGIELQSSNGKFRFIKSQFLVLNSTSAQYYSTPNKLLSMDDLGKMSMEGNSFLTSDYGDTRFRKLVLDDDGNLRIYSFYPEQNSQWIEVWKGVWEMCQIKGKCGPNSICVPRADLNTSTYCVCPSGFSQADGPEEGCTRRIPLSQHTQFLKLDYVNYTSDGSMYQIKAENFTICESSCSGDRTCLGFGFKYDGSGYCVLLKGSQLLYGYWSPGTETALFVRVDKSESTPSNFIGMTEVMQTTCPVNISLPLPPKDSNTTARNIAIICTLFAAELIAGVAFFWSFLKRYIKYRDMATTLGLELLPAGGPKRFTFSEIKAATNDFSNLIGKGGFGDVYKGELPDHRVVAVKCLKNVTGGDNEFWAEVKIIARMHHLNLVRLWGFCAEKGQRILVYEHVPAGSLDKYLFSVKSHNNNIHLKDQSSPSPQQRPALDWNIRYRIALGVARAIAYLHEECLEWVLHCDIKPENILLGDDFCPKISDFGLAKLRKKEDMVTMSRRRGTPGYMAPEWITADPITSKADVYSFGMVLLELVSGIRNFEIQDSVVRSEEWYFPGWAFDKMFKEMRVEDILDAQIRDAYDSRAHFDMVNRMVKTAMWCLQDRPELRPTMGKVAKMLEGTVEIIDPKKPTVFFLGDD	792

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mupr16833g00001	792	Gene3D	-	38	143	IPR036426	-
	Mupr16833g00001	792	ProSiteProfiles	Protein kinase domain profile.	478	776	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mupr16833g00001	792	SMART	serkin_6	478	772	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mupr16833g00001	792	FunFam	S-receptor-like serine/threonine-protein kinase	450	552	-	-
	Mupr16833g00001	792	FunFam	Serine/threonine-protein kinase	553	783	-	-
	Mupr16833g00001	792	Gene3D	Transferase(Phosphotransferase) domain 1	554	783	-	-
	Mupr16833g00001	792	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	615	627	IPR008271	GO:0004672\|GO:0006468
	Mupr16833g00001	792	Gene3D	Phosphorylase Kinase; domain 1	452	552	-	-
	Mupr16833g00001	792	PIRSF	SRK	4	792	IPR024171	GO:0004674
	Mupr16833g00001	792	SUPERFAMILY	Protein kinase-like (PK-like)	461	773	IPR011009	-
	Mupr16833g00001	792	Pfam	Protein kinase domain	482	769	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mupr16833g00001	792	SMART	blect_4	44	144	IPR001480	-
	Mupr16833g00001	792	Pfam	S-locus glycoprotein domain	208	286	IPR000858	GO:0048544
	Mupr16833g00001	792	ProSitePatterns	Protein kinases ATP-binding region signature.	484	506	IPR017441	GO:0005524
	Mupr16833g00001	792	SUPERFAMILY	alpha-D-mannose-specific plant lectins	85	159	IPR036426	-
	Mupr16833g00001	792	CDD	STKc_IRAK	484	774	-	-
	Mupr16833g00001	792	ProSiteProfiles	PAN/Apple domain profile.	294	380	IPR003609	-
	Mupr16833g00001	792	PANTHER	OS07G0415500 PROTEIN	10	787	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mupr16833g00001	Mupr-Chr16833	2551	4929	Dispersed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mupr16833g00001	393	784	Receptor kinase-like Gene Family	AT4G18250	36.855	2.34e-76	259

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_SD-2b	Mupr16833g00001		Pkinase	1.5e-45	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mupr16833g00001	-		-	gmx:100775518	1345.87