Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr16830g00002 ATGGAGCAATATAGCTCGCTTCTCTTTCCCTTAGCCAAAACAGGGAATTTTCTTCATCTCGCGATGGCACAACCGTGGACACCGTTGAAGTTCTTGTTGCCGGCGGTGCTGACTCTGTTTTTTGCATTGAGCCAGAAACAGAGTCTTTGTTCGACGCTGAAGAGCGAAGGTTTGGCGCTGCTGGCGTTGAGGGAGAGGGTGGTGAGTGACCCGCAGGGGGCTTTATCAAGCTGGAGTGGCGGAGATGGAGACATTGATCCATGCGCTTGGTTCGGTGTAGAGTGTTTCCACGGTAATGTTGTGACCTTGAATTTAAAAGATCTTTGTCTTGAAGGAACACTAGCACCAGAAATTGGAAAGCTGGTTCACATAAAATCAATCATTTTGCGTAACAATTCTTTCTTTGGAGAAATTCCCAAGGAGATTCTACACTTAGAGGAGTTGGAGGTCCTTGACTTGGGACATAACAACTTTAGTGGATCACTTCCATTTGACCATGGCAATATGCCATCCCTGACCACTCTTTTATTGGACAACAATTACTATCTAGCCAACTTAACTCCAGAACTGGATAAGCTCAAGATGAATTCTGAATTTCATGCCAATGAAGAACAACTAACTGGTGCCACCACTAGAGAAGCATTTGTAGCAAATGATGCTAATGCACCCAGAATCCAAGGGGATGTTAACCAAGGGTCACTTAAACAATCAGCACCACATTTTCCCTTCTCATTACCACCAGATTTTGAGCCTTTCTCATCATCACCATCAGAAAGTCCTTCATACTCACCAGGATCAGCTCCATTATCATATTCGCCATCACCATCTCCCTCCAGTATTTTTTTCACTCCTTCACCCTCTCCTTCACCTGTAATGTCACCAACTCCAGATATATCACCCTCAGCAAACACACCTCTCACTGTATCTACACCACCAGAGTTTAATTTGGATTCAGCACCTGGCCCTTCTCCATTTTCTAACCAAGGGAATACATACAGTTCCAATCCAATGCATCATTCAGTGATAATCTGGTCTGCAGTTGGCGGCTTCTCCTTGTTGATTTTGGTGTCGGCCATTACTTTTGCTTGCTTTCGAAGCAGGAAGGTTGTGTCTGTTAATCCTTGGTCCACAGGGTTGAGTGGCCAGCTGCAGAAAGCTTTTGTGAAAGGTGTGCCAAATCTCAAACGACCAGAACTTGAAGCAGCTTGTGAATATTTCAGCAACATCATTGGTTCTCTTCCTGATGGTACTGTGTATAAGGGGACTCTCTCCAGTGGAGTTGAGATAGCTGTAGCATCGTTTGCAGTGATGGCAGCTCAAAACTGGTCAAAAAGTATGGAAGCTCAATTCCGAAAGAAGATTGCAACATTATCTAGAGTGAACCACAAGAATTTTGTGAATCTGATCGGGTATTGCGAAGAGAATAAGCCATTCTCAAGAATGATGGTTTTAGAGTACGCTCCAAATGGAACACTCTTTGAGCATCTACACATTAGAGAAGCAGAAGAACTAAATTGGACAATGAGAATGAGGATAGCTATGGGAATAGCCTACTGCCTAGAGTATATGCATGAACTGAAACCACCCATTGCCCATAGAAACCTGCAATCTTCCTTTATATACCTTACTGAAGATTATGCTGCTAAAATATCAGATATTAGTTTTTGGAATGACATGTGTGCTACTAAGAATGGGTCAGCAACCACACAACTCTTGGAAACACCATCAGCAGATACCAAGGACAATGTTTACGGCTTTGGAATAGTATTGTTTGAGTTGATTACAGGGAGAATTCCCCATGCTGGGGACAATAACCTTCTGGCAGATTGGGCAGCAGAATATGTAAGGTGGGGGAAATCCCTAAGAGATGTTGTGGATCCAAGATTAAACTCTTTGCAAGAAGAAGAGATTGAGGAATGGTCTGAAGTGATAAGAAATTGTGTGCATCCAGATCCAGAGAAAAGGCCAAGTATGAAAGAAGTTACAGCTAGACTCAAGGAAATCACAGCTATGGGGCCTGATGGAGCAAATCCTAAAGGATCACCACTTTGGTGGGCAGAAATGGCAATTACCTCCACCGATTCAAGTTGA 2091 0.4342 MEQYSSLLFPLAKTGNFLHLAMAQPWTPLKFLLPAVLTLFFALSQKQSLCSTLKSEGLALLALRERVVSDPQGALSSWSGGDGDIDPCAWFGVECFHGNVVTLNLKDLCLEGTLAPEIGKLVHIKSIILRNNSFFGEIPKEILHLEELEVLDLGHNNFSGSLPFDHGNMPSLTTLLLDNNYYLANLTPELDKLKMNSEFHANEEQLTGATTREAFVANDANAPRIQGDVNQGSLKQSAPHFPFSLPPDFEPFSSSPSESPSYSPGSAPLSYSPSPSPSSIFFTPSPSPSPVMSPTPDISPSANTPLTVSTPPEFNLDSAPGPSPFSNQGNTYSSNPMHHSVIIWSAVGGFSLLILVSAITFACFRSRKVVSVNPWSTGLSGQLQKAFVKGVPNLKRPELEAACEYFSNIIGSLPDGTVYKGTLSSGVEIAVASFAVMAAQNWSKSMEAQFRKKIATLSRVNHKNFVNLIGYCEENKPFSRMMVLEYAPNGTLFEHLHIREAEELNWTMRMRIAMGIAYCLEYMHELKPPIAHRNLQSSFIYLTEDYAAKISDISFWNDMCATKNGSATTQLLETPSADTKDNVYGFGIVLFELITGRIPHAGDNNLLADWAAEYVRWGKSLRDVVDPRLNSLQEEEIEEWSEVIRNCVHPDPEKRPSMKEVTARLKEITAMGPDGANPKGSPLWWAEMAITSTDSS 696
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr16830g00002 696 Pfam Leucine rich repeat N-terminal domain 54 95 IPR013210 -
Mupr16830g00002 696 MobiDBLite consensus disorder prediction 296 311 - -
Mupr16830g00002 696 Gene3D Ribonuclease Inhibitor 52 229 IPR032675 -
Mupr16830g00002 696 SUPERFAMILY Protein kinase-like (PK-like) 396 665 IPR011009 -
Mupr16830g00002 696 MobiDBLite consensus disorder prediction 224 311 - -
Mupr16830g00002 696 Gene3D Transferase(Phosphotransferase) domain 1 487 674 - -
Mupr16830g00002 696 MobiDBLite consensus disorder prediction 224 238 - -
Mupr16830g00002 696 PANTHER PROTEIN MALE DISCOVERER 2 35 693 - -
Mupr16830g00002 696 FunFam Inactive receptor-like serine/threonine-protein kinase 378 486 - -
Mupr16830g00002 696 FunFam Nuclear pore complex protein NUP107 53 212 - -
Mupr16830g00002 696 MobiDBLite consensus disorder prediction 279 295 - -
Mupr16830g00002 696 SUPERFAMILY L domain-like 54 194 - -
Mupr16830g00002 696 ProSiteProfiles Protein kinase domain profile. 404 668 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr16830g00002 696 Gene3D Phosphorylase Kinase; domain 1 381 486 - -
Mupr16830g00002 696 MobiDBLite consensus disorder prediction 250 278 - -
Mupr16830g00002 696 Pfam Protein tyrosine and serine/threonine kinase 409 665 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr16830g00002 Mupr-Chr16830 10809 18221 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr16830g00002 87 678 Receptor kinase-like Gene Family AT5G65700 26.547 4.68e-45 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Mupr16830g00002 PK_Tyr_Ser-Thr 3e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr16830g00002 - - gmx:100779427 1065.06