Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr16829g00002 ATGAGGACACCATGTTGTGAGAGAATGGGATTGAAGAAGGGACCTTGGACTGCTGAAGAAGATCAGATATTGGTTTCTCATATTCAACTTTACGGCCATGGAAACTGGCGTGCTCTTCCTAAACAAGCTGGTTTGTTAAGGTGTGGCAAGAGTTGTAGGCTTCGTTGGATAAATTACTTGAGGCCAGATATTAAACGAGGCAAATTCAGCAAGGAAGAAGAAAATACCATCCTAAAGCTACATGAAATTCTTGGAAATAGGTTGGTACCTATCATGTTCACTCTAGGTGGAATAAACAACTCCAACCATAATCTTAATGTGATTAATTTCATTGTGAACCCCTTGATGCTCAGATGGTCTGCTATTGCGGCAAGCTTACCCGGAAGAACAGACAATGAAATAAAGAATTTTTGGCATACCCATTTGAAGAAGAAGATCGACAAAAGTGGAGTGCACAATGCCAATGTTTGCTCACATATCTTGCATGAGACACAAGCAAATAGTTCGGATGCTTCTAGTGTCGCTGGAAATGTAATGATTGCCAATTATGGTTTACCCTCAAGGAAGAATCCACCTACAGGATTTTACGCTGCAGTCTCCTCAGATACTTGTGGAGAAACTATGGACAATCATGGTTCCTCTCAGCTCAGTGAAGAAATGGAATTTTGGTACAATATTTTCATCAAATCGGGACAACCATCATGA 705 0.4057 MRTPCCERMGLKKGPWTAEEDQILVSHIQLYGHGNWRALPKQAGLLRCGKSCRLRWINYLRPDIKRGKFSKEEENTILKLHEILGNRLVPIMFTLGGINNSNHNLNVINFIVNPLMLRWSAIAASLPGRTDNEIKNFWHTHLKKKIDKSGVHNANVCSHILHETQANSSDASSVAGNVMIANYGLPSRKNPPTGFYAAVSSDTCGETMDNHGSSQLSEEMEFWYNIFIKSGQPS 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr16829g00002 234 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 8 64 IPR017930 -
Mupr16829g00002 234 ProSiteProfiles Myb-like domain profile. 8 60 IPR001005 -
Mupr16829g00002 234 FunFam MYB-related transcription factor 12 65 - -
Mupr16829g00002 234 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 2 160 - -
Mupr16829g00002 234 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 118 146 IPR017930 -
Mupr16829g00002 234 CDD SANT 15 60 IPR001005 -
Mupr16829g00002 234 SUPERFAMILY Homeodomain-like 14 89 IPR009057 -
Mupr16829g00002 234 Gene3D - 12 65 - -
Mupr16829g00002 234 SUPERFAMILY Homeodomain-like 115 150 IPR009057 -
Mupr16829g00002 234 Pfam Myb-like DNA-binding domain 16 75 - -
Mupr16829g00002 234 ProSiteProfiles Myb-like domain profile. 61 142 IPR001005 -
Mupr16829g00002 234 SMART sant 12 62 IPR001005 -
Mupr16829g00002 234 SMART sant 65 144 IPR001005 -
Mupr16829g00002 234 CDD SANT 68 142 IPR001005 -
Mupr16829g00002 234 Gene3D - 68 146 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr16829g00002 Mupr-Chr16829 12575 13455 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr16829g00002 2 227 MYB Transcription Factor Family AT2G31180 47.345 1.53e-64 199
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mupr16829g00002 Myb_DNA-bind_6 1.9e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr16829g00002 K09422 - gmx:102663040 339.732