Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr16817g00001 ATGCGTGCTCTAACAGAGGTGGCTAAGCTTAATGCAAGCGAATGGTACTTCTTCAGCTTTCGTGACCGCAAATATGCAACTGGCTTTCGGACCAATAGGGCAACGACATCTGGCTATTGGAAAGCAACAGGAAAGGATCGTACGGTGTTTGACCCAACCACGCGTGAGGTTGTAGGGATGAGGAAGACGTTAGTGTTCTATAGGAACAGGGCTCCAAATGGCATCAAAACGGGTTGGATCATGCACGAGTTTCGCTTGGAGACGCCACACATGCCCCCTAAGGAGGACTGGGTTTTGTGTAGAGTGTTTCACAAAGGCAAAGCAGACAACAGTGCCAAACTCAACCCACAACTCATGTATGAGAGCACAGTTCCATCCCTAACTTTGGCTTCGTCATCTCCAACCAACCAAACCACACCGATTGGGTATAACCAACTTGCCCCTTTCTCCTCCTCAATGACAACCCATCACCATAATAATCATAATAATAATCATCATCATTATCATCATCAACAACATCCAGACCCAAGCCAAAACAATAATTCTTTGATGAGTCTCCTTCAGTTTTCGAGGGAAACAAACACCAACTCTAGCACGGTTACTCAAATTAGTCCCAAATGTGATGATGGGTATGGGTTCTTATGGGACATGGATCTCGAAGAAACTAGCTTCCATGATGGCGTGGCATCAAACCTAGATGGAATGAGATTCGAGGTTGATAATAATAGTGTGGTCTTGCTATGA 744 0.4516 MRALTEVAKLNASEWYFFSFRDRKYATGFRTNRATTSGYWKATGKDRTVFDPTTREVVGMRKTLVFYRNRAPNGIKTGWIMHEFRLETPHMPPKEDWVLCRVFHKGKADNSAKLNPQLMYESTVPSLTLASSSPTNQTTPIGYNQLAPFSSSMTTHHHNNHNNNHHHYHHQQHPDPSQNNNSLMSLLQFSRETNTNSSTVTQISPKCDDGYGFLWDMDLEETSFHDGVASNLDGMRFEVDNNSVVLL 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr16817g00001 247 SUPERFAMILY NAC domain 4 105 IPR036093 GO:0003677|GO:0006355
Mupr16817g00001 247 Gene3D NAC domain 2 109 IPR036093 GO:0003677|GO:0006355
Mupr16817g00001 247 ProSiteProfiles NAC domain profile. 1 105 IPR003441 GO:0003677|GO:0006355
Mupr16817g00001 247 Pfam No apical meristem (NAM) protein 6 86 IPR003441 GO:0003677|GO:0006355
Mupr16817g00001 247 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 4 187 - -
Mupr16817g00001 247 MobiDBLite consensus disorder prediction 153 182 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr16817g00001 Mupr-Chr16817 830 2288 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr16817g00001 4 164 NAC Transcription Factor Family AT1G76420 46.629 4.55e-45 152
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mupr16817g00001 NAM 7.1e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr16817g00001 - - gmx:100783645 392.119