Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr16816g00001 ATGTATGGGGATTGCCAAGTTATGTCAAGTATGGGAGGGAACGTAGTAGTAAACTCGGATACACTATTCTCCTCCTCGATCCAGAATTCTAACTTCAACTTCATCCCCACCATGCCTTTTCAGCCTTTTCCTTCCATGATCTCATCATCACTTTTAAAACAGAAAGAAGAAGATGGAATGTTGCGAGGGAAGGAAGAGATGGAAAGTGGGTCAGGTAGTGAACAAGTTGAAGACAAGTCAGGGAACGAGCAAGAGAGTGAACAAGCAACGAAGAAGAAACGTTATCACAGGCACACTGCTCGCCAGATCCAAGAAATGGAAGCTTTGTTCAAGGAATGTCCGCACCCGGATGATAAGCAGAGGCTAAAACTGAGCCATGAATTGGGTCTGAAACCGCGCCAGGTTAAGTTCTGGTTCCAGAACCGTCGAACCCAGATGAAGGCACAACAAGACCGTGCAGATAATGTCATACTTAGAGCCGAGAATGAGACTCTAAAGAGTGAGAACTATCGTTTACAAGCAGCGCTGCGTAGTGTTATCTGTCCCAATTGTGGTGGCCCATGCATAATGGGCGCTGATCTGGGCTTGGACGAACACCAACTCCGCATTGAAAATGCCCGCTTAAGAGAAGAGTTAGAGCGCGTGTGTTGTCTCACTACAAGATACACTGGACGTTCAATCCAAACAATGGCAGCAGGAGCTACTCTTATGGCCCCATCATTGGATTTGGACATGAACATATACCCAAGGCACTTTGCAGATCCTATTGCTCCATGCACGGAGATGATTCCTGTGCCAATGTTGCCTCCTGAAGCTTCACCCTTTGCTGAGGGTGGCGTCCTGATGGAAGAAGAGAAGTCTCTGGCATTGGAGTTTGCGGCTTCTTCCATGGCTGAACTTGTAAAGATGTGCCATACAAACGAGCCACTTTGGATCCGAAGCAATGAGAGTGAAAGGGAAGTGCTCAATTTTGAAGAGCACGCGAGGATGTTTCCTTTGCCTCTGAATCTCAAGAACCGAAGTGAACTGAGAACGGAAGCTAGTCGTGACACTGCTGTGGTTATAATGAATAGTGTCACTCTTGTTGATGCTTTCCTTGATGCTCAAAAATGGATGGAATTGTTTCCTACAATCGTTTCTAGAGCAAAAACTGTCCAAATCATATCTACTGGTGCTTCTGGTCATGCAAGCGGGACTCTTCAGCTGATGTACGCAGAATTCCTAGTTCTTTCTCCATTGGTGTCCACTCGTGAGACGCATTTTCTTCGGTATTGTCAACAAAATGCTGAGGAGGGAACCTGGGCCATTGTTGATTTCCCTGTTGATAGCTTTCACCAAAATTTTCACCCTTCTTATCCAAGATACTGCAGGAGGTCCTCTGGCTGTGTGATTCAAGATATGCCAAATGGGTATTCAAGGGTAACATGGGTTGAGCATGCAAAAGTAGAAGAGAAACCAGTGCATCAGATATTCTGCAACTATGTGTACAGTGGAATGGCATTCGGAGCACAACGTTGGTTAGGAGTTTTGCAGAGACAATGCGAGAGGGTCGCGAGCCTTATGGCCAGAAACATATCAGATCTTGGAGTGATACCTTCGCCAGAAGCGAGAAAGAACTTGATGAAACTAGCACAAAGAATGATTAAAACATTTGGCCTAAACATGAGCACTTCAGGTGGTCAATCATGGACGGCTATATCAGATTCTCCTGAAGACACTGTTAGAATCACAACAAGGAAAATCACAGAGCCTGGGCAACCTAATGGAGTGATTCTAAGTGCCGTTTCAACCACTTGGTTGCCCTATTCTCACACCAAGGTCTTTGATCTCCTGAGGGACGAACGCCACAGATCTCAGATGGATGCCCTTTCCAATGGGAACTCATTGAATGAAGTGGCTCATATTGCAAATGGCTCACATCCAGGAAACTGCATTTCTCTTCTTCGCATAAATGTAGCGAGCAACTCATCCCAGAACGTGGAGCTAATGTTGCAAGAGAGTTGCACCGATCCTTCTGGAAGCTTAGTAGTGTACACCACCATCGATGTGGATTCCATCCAGTTAGCCATGAGTGGCGAGGACCCCTCTTGCATTGCCCTTCTCCCTCAAGGCTTCATGATAGTACCCATGATATCATCACCCAACGTTGACACACCCATTGATGCCAATACTTCTCAGCCTCCACCTCTCAACTCAGGTTGCCTCCTAACCATGGGGCTGCAAGTTCTTGCCAGCACAATCCCTTCTGCAAAGCTCAACCTCTCCAGTGTCACCGCCATCAACAACCACCTCTGTAACACCTTGCACCAAATTGAAGCTGCTCTTTCTAGCTCCCATGACAATGCCACTTTCCTTTGCACTGAACCCACCACTAGTGCCCCTCTCAAGCAGTGA 2394 0.4666 MYGDCQVMSSMGGNVVVNSDTLFSSSIQNSNFNFIPTMPFQPFPSMISSSLLKQKEEDGMLRGKEEMESGSGSEQVEDKSGNEQESEQATKKKRYHRHTARQIQEMEALFKECPHPDDKQRLKLSHELGLKPRQVKFWFQNRRTQMKAQQDRADNVILRAENETLKSENYRLQAALRSVICPNCGGPCIMGADLGLDEHQLRIENARLREELERVCCLTTRYTGRSIQTMAAGATLMAPSLDLDMNIYPRHFADPIAPCTEMIPVPMLPPEASPFAEGGVLMEEEKSLALEFAASSMAELVKMCHTNEPLWIRSNESEREVLNFEEHARMFPLPLNLKNRSELRTEASRDTAVVIMNSVTLVDAFLDAQKWMELFPTIVSRAKTVQIISTGASGHASGTLQLMYAEFLVLSPLVSTRETHFLRYCQQNAEEGTWAIVDFPVDSFHQNFHPSYPRYCRRSSGCVIQDMPNGYSRVTWVEHAKVEEKPVHQIFCNYVYSGMAFGAQRWLGVLQRQCERVASLMARNISDLGVIPSPEARKNLMKLAQRMIKTFGLNMSTSGGQSWTAISDSPEDTVRITTRKITEPGQPNGVILSAVSTTWLPYSHTKVFDLLRDERHRSQMDALSNGNSLNEVAHIANGSHPGNCISLLRINVASNSSQNVELMLQESCTDPSGSLVVYTTIDVDSIQLAMSGEDPSCIALLPQGFMIVPMISSPNVDTPIDANTSQPPPLNSGCLLTMGLQVLASTIPSAKLNLSSVTAINNHLCNTLHQIEAALSSSHDNATFLCTEPTTSAPLKQ 797
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr16816g00001 797 SUPERFAMILY Bet v1-like 283 518 - -
Mupr16816g00001 797 SUPERFAMILY Bet v1-like 534 772 - -
Mupr16816g00001 797 SMART HOX_1 90 153 IPR001356 GO:0003677
Mupr16816g00001 797 MobiDBLite consensus disorder prediction 60 98 - -
Mupr16816g00001 797 CDD homeodomain 92 150 IPR001356 GO:0003677
Mupr16816g00001 797 SMART START_1 291 516 IPR002913 GO:0008289
Mupr16816g00001 797 Pfam Homeodomain 92 147 IPR001356 GO:0003677
Mupr16816g00001 797 ProSitePatterns 'Homeobox' domain signature. 124 147 IPR017970 GO:0000981|GO:0006355
Mupr16816g00001 797 ProSiteProfiles START domain profile. 282 519 IPR002913 GO:0008289
Mupr16816g00001 797 MobiDBLite consensus disorder prediction 60 92 - -
Mupr16816g00001 797 Gene3D - 338 500 IPR023393 -
Mupr16816g00001 797 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 88 775 IPR042160 -
Mupr16816g00001 797 FunFam Homeobox-leucine zipper protein HDG1 77 165 - -
Mupr16816g00001 797 ProSiteProfiles 'Homeobox' domain profile. 89 149 IPR001356 GO:0003677
Mupr16816g00001 797 CDD START_ArGLABRA2_like 286 515 - -
Mupr16816g00001 797 SUPERFAMILY Homeodomain-like 84 150 IPR009057 -
Mupr16816g00001 797 Gene3D - 76 160 - -
Mupr16816g00001 797 Pfam START domain 292 516 IPR002913 GO:0008289
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr16816g00001 Mupr-Chr16816 4910 9485 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr16816g00001 8 778 Homeobox Transcription Factor Family AT5G46880 57.365 0.0 869
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Mupr16816g00001 START 9.9e-39 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr16816g00001 - - gmx:100812829 1433.7