Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr1678g00006 ATGTCTTCTAACGCCATCATCCTATCCACCCCTTCTTCTTATCTATACGATGTCTTTGTCAGCTTCCGCGGTGAAGACACCCGCAACAACTTTACTGCCTTTCTCTTTTATGCTCTTCAAAAAAATGGCATTGATGCCTTCAAAGATGATGCAGATCTCAAGAAAGGCGAATCCATAGCACCCGAGCTGCTACAAGCCATTCAAGCCTCTCGTATTTTCATTGTCGTCTTCTCTAAGGATTATGCTTCCTCAACTTGGTGCTTGCGTGAACTTTTACAAATATGCAATTGCATTGCAGCATCGCCAAGACATGTTCTGCCTATTTTTTATGATGTCGATCCATCTGAGGTACGAAAACAAAGTGGATATTTTGAGAAAGTCTTTGCTGAACACGAAGAAAGATTCAGAGAGGATAAAGAGAAGATGGAGGAAGTGCAGAGATGGAGACACACTCTCACACAAGTGGCCAATATCTCTGGTTGGGATATCCGAAATAAGGCACAACATGCAGAGATTGAACAAATTGTTCTAAGAATAATAAATATATTGGGTCCCAAATTTTTAAGTCTTCCAAATGATGATCTAGTTGGGATGCAATCTCGTTTTGAAGAATTAGCAAAGCTTTTACATTTGGGGTCAATTAATGATGTTCGAGTTGTCGGAATTAGCGGGATGAGTGGAATAGGAAAGTCAACTATTGTTGGTTCTTTATTTGAAAGAATCTCTCATCAATATGATTGTCGTTGTTTTATTGATGATGTAAGTAAAATTTATCGAGATTATGGTGCATTAGGCATATTAAAACAGTTACTTTCTCAGTGTCTAAATGAAAAAAAATTAAAGATTTGCAATGTTTATGAGGGAACATGTCTGGTATGGAATAGACTACGCAATGCAAGGGCTCTTATAGTTCTTGATAATGTTGATCAAATTGGACAACTAAAGATGTTTTCAGGGAGTAGAGAGACTTTATTACGTGAATGCCTTGGTGGAGGGAGCAGAATCATCATAACTTCTAGGGATCAACATATATTGAGGACACATGGAGTTGATGAAGTTTACCAAGTCCAACCGTTGAATAAGGAAGATGCTGTTGAGTTGTTTTGCAGAAATGCTTTTAAAAATAATTATATTATAAGTGGTTATGAAGACTTGACATACGATGTATTGTCACATGCTCAAGGTCATCCCTTGGCAATTCAAGTATTGGGCTCATCTTTGTTAGGCCAAAATGTCTCACAGTGGAGAAGTGCATTGGCTAGGCTAAGAAAAACTAAAAGTAAAAATATTATGGATGTGCTGCGAATAGGTTTTGATGAGCTTGAAGACATGGAGAAGGAAATATTTCTAGATATTGCTTGCTTTTTCAATTATCCCAGTAATGAGAAATCTGTGAAGGAAGTTCTAGATTTTCGTGGATTTCATCCTGAATATGGCCTACAAGTTCTCATTGCAAAATCGCTCATCAGTATTTGCTCTGGATACATTTTTATGCATGGCTTATTGAAAGATTTGGGCTGGTTTATTGTTCGAGAAAAATCACCTATGAAGCCAAGAAAGTGGAGTAGGTTGTGGGATTTCCAAGATTTCCTCAAAGTTATGTCAGACAATGTGGAAGCAGAAAATCTTGAAGCAATAGCTGTTCAACAGGATGAGATGGAGTTTCGTGAAACAACAATAAAGATAGATGCTTTATCAAAAATGAGTCACCTGAAGTTGCTCAAGCTTTCGAATTTGAACTTTTCCGGAAGCCTCAATCATCTTTCCAATGAGTTAGGATATCTTACTTGGAATAATTATCCTTTTGAGTCTTTGCCTCCAAGTTTTCAGCCAAACAAACTTGTTCAGTTGTCCCTGGTTGACAGCAACATCAAACAACTATGGAAAGACACAATGGTA 1899 0.3755 MSSNAIILSTPSSYLYDVFVSFRGEDTRNNFTAFLFYALQKNGIDAFKDDADLKKGESIAPELLQAIQASRIFIVVFSKDYASSTWCLRELLQICNCIAASPRHVLPIFYDVDPSEVRKQSGYFEKVFAEHEERFREDKEKMEEVQRWRHTLTQVANISGWDIRNKAQHAEIEQIVLRIINILGPKFLSLPNDDLVGMQSRFEELAKLLHLGSINDVRVVGISGMSGIGKSTIVGSLFERISHQYDCRCFIDDVSKIYRDYGALGILKQLLSQCLNEKKLKICNVYEGTCLVWNRLRNARALIVLDNVDQIGQLKMFSGSRETLLRECLGGGSRIIITSRDQHILRTHGVDEVYQVQPLNKEDAVELFCRNAFKNNYIISGYEDLTYDVLSHAQGHPLAIQVLGSSLLGQNVSQWRSALARLRKTKSKNIMDVLRIGFDELEDMEKEIFLDIACFFNYPSNEKSVKEVLDFRGFHPEYGLQVLIAKSLISICSGYIFMHGLLKDLGWFIVREKSPMKPRKWSRLWDFQDFLKVMSDNVEAENLEAIAVQQDEMEFRETTIKIDALSKMSHLKLLKLSNLNFSGSLNHLSNELGYLTWNNYPFESLPPSFQPNKLVQLSLVDSNIKQLWKDTMV 633
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr1678g00006 633 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 16 627 IPR044974 GO:0006952
Mupr1678g00006 633 Pfam NB-ARC domain 214 428 IPR002182 GO:0043531
Mupr1678g00006 633 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 182 452 IPR027417 -
Mupr1678g00006 633 SUPERFAMILY L domain-like 559 628 - -
Mupr1678g00006 633 Gene3D - 13 186 IPR035897 -
Mupr1678g00006 633 Gene3D Ribonuclease Inhibitor 531 633 IPR032675 -
Mupr1678g00006 633 SUPERFAMILY "Winged helix" DNA-binding domain 429 533 IPR036390 -
Mupr1678g00006 633 SUPERFAMILY Toll/Interleukin receptor TIR domain 11 161 IPR035897 -
Mupr1678g00006 633 Gene3D - 358 442 IPR042197 -
Mupr1678g00006 633 ProSiteProfiles TIR domain profile. 14 183 IPR000157 GO:0007165
Mupr1678g00006 633 SMART till_3 15 158 IPR000157 GO:0007165
Mupr1678g00006 633 Pfam TIR domain 16 179 IPR000157 GO:0007165
Mupr1678g00006 633 PRINTS Disease resistance protein signature 393 407 - -
Mupr1678g00006 633 PRINTS Disease resistance protein signature 295 309 - -
Mupr1678g00006 633 PRINTS Disease resistance protein signature 566 582 - -
Mupr1678g00006 633 PRINTS Disease resistance protein signature 219 234 - -
Mupr1678g00006 633 Gene3D - 189 352 IPR027417 -
Mupr1678g00006 633 FunFam Disease resistance protein (TIR-NBS-LRR class) 12 184 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr1678g00006 Mupr-Chr1678 63327 65511 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr1678g00006 196 631 WRKY Transcription Factor Family AT5G45050 32.751 4.40e-63 224
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr1678g00006 - - gmx:100814717 818.92