Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr1678g00005 ATGCCAGATTTAGGGGAGGCCATAAATCTTGAGTGCATATTGTTGCAAGGATGTAAGAAACTGAAGCAGATCCATTCATCCATGGGTCTCCTAAGAAAGTTGACTATTTTGAATTTGAGAGGCTGCACAAGTCTAATCAAGTTACCTAGTTTCAGTGAGGACCTAAATCTTGAAAACCTAGATCTTGAAGGATGTAGACAACTTGGGGAAATTAATCAATCTATTGGTCTTCTAAGAAAGCTTACCTTTCTGAATTTGAAAGACTGCAAAAGTCTAGTAAGCTTACCCAACAGCATATTGGGTCTCAATTCTCTCGAATATCTGAATCTCTCTGGCTGTTCAAAATTGCAGTTATTAGGAGAAGCAAGGGATGGTGAAGCTCCTATTCGTTCCCACACAACATTGTCCGTCATTAAATGGTGGTTGTATTCCAGAGCACATAAAGATTCAGTTAGATTTTTGTGGCCTTCCTCATATAGTTTCCCATTACCATGTATGCGTGAACTTGATCTAAGTTTCTGCAATTTAGTTCAAATTCCTGATGCTATTGGAAATTTAAGTTGCTTAGAAATACTAAAATTAAGGGGAAACAAGTTTGTAAAACTACCCGACCTCATGGAGTGTTCCAAACTGCATTATTTAAACTTACAAGATTGCGAGAAGTTGAAATATTTGCCTCAGCTCCCTTCACGAACTTTCTCGCTGTCAAATGTTTACATATTGCCATTGCTGCACCGCGGCAGGATTTCACGTATTATTATTCCAAGAAATGATATGACATATGAAAGTATTATTCCAGGAAGTGAAATACCAAGGTGGTTCAAATATCAGCGTGCGGGCAACCACAGTATTCCATATCATGCTGTGAATTTCGATGGTTTCCTGGCTGTTCTGGCTTGTGTAGTTTTTGCAATTTGGAACATAAGATATGATGGTATTGAAATTCCAGCAGATGATGGTTATGTTGTTGGGAAGGTTACACCGTCGAAATCTGATGAAATGAATGAAGCACCGTGCTGGGATTTGAGGGTCCACTTAGCTTTAGATGTAGCAAGAGGCTTGGAGTATGTTCATGATGGGGCTGTTCCTCCTGTAATCCATCGAGATATCAAATCTTCAAATATTCTGTTGGACCAATCCATGCGAGGCAGGGTTTCTGATTTTGGACTTTCAAGAGAAGAGATGGTGGATAAACATGCAGCTATTCATGGTACCTTGGCTATCTTGACCCAGACTAAATATCTTCAGGAACATTCACGAAGAAAAGTGATGATTTAA 1278 0.392 MPDLGEAINLECILLQGCKKLKQIHSSMGLLRKLTILNLRGCTSLIKLPSFSEDLNLENLDLEGCRQLGEINQSIGLLRKLTFLNLKDCKSLVSLPNSILGLNSLEYLNLSGCSKLQLLGEARDGEAPIRSHTTLSVIKWWLYSRAHKDSVRFLWPSSYSFPLPCMRELDLSFCNLVQIPDAIGNLSCLEILKLRGNKFVKLPDLMECSKLHYLNLQDCEKLKYLPQLPSRTFSLSNVYILPLLHRGRISRIIIPRNDMTYESIIPGSEIPRWFKYQRAGNHSIPYHAVNFDGFLAVLACVVFAIWNIRYDGIEIPADDGYVVGKVTPSKSDEMNEAPCWDLRVHLALDVARGLEYVHDGAVPPVIHRDIKSSNILLDQSMRGRVSDFGLSREEMVDKHAAIHGTLAILTQTKYLQEHSRRKVMI 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr1678g00005 425 SUPERFAMILY Protein kinase-like (PK-like) 339 400 IPR011009 -
Mupr1678g00005 425 ProSitePatterns Serine/Threonine protein kinases active-site signature. 365 377 IPR008271 GO:0004672|GO:0006468
Mupr1678g00005 425 Pfam Protein kinase domain 345 394 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr1678g00005 425 ProSiteProfiles Protein kinase domain profile. 238 425 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr1678g00005 425 Gene3D Ribonuclease Inhibitor 2 124 IPR032675 -
Mupr1678g00005 425 Gene3D Ribonuclease Inhibitor 141 252 IPR032675 -
Mupr1678g00005 425 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 330 410 - -
Mupr1678g00005 425 Gene3D Transferase(Phosphotransferase) domain 1 329 416 - -
Mupr1678g00005 425 SUPERFAMILY L domain-like 2 245 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr1678g00005 Mupr-Chr1678 53093 56924 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr1678g00005 340 391 Receptor kinase-like Gene Family AT3G55950 69.231 4.71e-17 81.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-2 Mupr1678g00005 Pkinase 5.9e-11 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr1678g00005 - - ccaj:109807013 274.248