Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr1678g00004 ATGCCTTCTAACGCCATCATGGTATCCACCGCTTCTTCTTCTTACCTATACGACGTCTTTGTCAGCTTCCGCGGTGAAGACACACGCAACAACTTTACTGCTTTTCTCTTTGAAGCTCTTCGTAAAAATGGCATTGATGCCTTCAAAGATGATGCAGATCTCAAGAAAGGCGAATCCATAGCACCCGAGCTGCTACAAGCCATTCAAGCCTCTCGCATTTTCATTATCGTCTTCTCCAAGGATTATTCTTCCTCAACTTGGTGCTTGCGTGAACTTTTACAAATATGCAATTGCATTGCAACATCGTCAAGACATGTTCTGCCTATTTTTTATGATGTCCATCCGTCTGAGGTGCGAAAACAAAGTGGATATTTTGAGAAAGCCTTTGCCGAACACGAAGAAAGATTCAGAGAGGATAAAGAGAAGATGGAGGAAGTGCAGAGATGGAAAGACGCTCTCACACAAGTGGCCAATCTCTCTGGTTGGGATATCCAAAACGAGTCACAACCTGCAATGATTCAACAAATTGTTGAAAGGATAAAAAATATAATTGGTCCCAAATTTTTAAGTCTCCCAAATGATAATCTAGTTGGGATGCAATCTCGCGTTGAAGCATTAACAAAGCTTTTACGTTTAGATTTAGTTGATGAAGTTCGAGTTGTTGGAATTAGTGGGATGCCTGGAATAGGAAAGTCAACTGTTGCTCGTGCTTTATATGAAAATATTGCCAATCGATATGATTATATTCGTTATATTGATGATGTAAGCCAAATTTATCGACATTCTGGTCAACTTGGTGTACAAAAACGATTGCTTTGTCTGTCTTCGAATGAAAAGGATCTAGAGATTTGCAATGTTTCTGAGGGAACGTGTTTGGTATGGAATAGGCTACATAATGCAAGAGCACTTGTAATTTTTGATAATGTTGATCAAATGGAACAGCTACAAATATTTTCAGGGAACAGAGACTCTATGTTGCGTGAATGCCTTGGTGGAGGAAGCAGAATCATCATAATTTCTAACGATGAACAAATATTGAAGACGCATGGAGTAGATAATGTTTATCAAGTCCAACCATTGGGTAGTAAAGATGCTTATGAGTTGTTCTGCAAAAAGGCTTTCAGAGGAATTGAAATAATTGCAAGGGATTATTATGAAAAGGTGATGCGTGATGTACTATCATATGCTGAAGGCCATCCCTTAGCCATCCAAGTATTGGGCTCATCTATGCATAGTAAAAGTATCGCTCAATGGGAGAGTACATTGGCTAAGCTAAGAGAACATAATAATAAAGACATTATGAAAGTACTGCGACTAGGTTTTGATGAGTTGGACGACACAAACAAAGAAATATTTCTAGATATTGCTTGTTTTTTCAATCATAAAGAAGTACAAAAAGTAACAGAAATTCTAGATTTTCGTGGATTTCATCCTGAATGTGGTTTACAAGATCTCGCTGACAAATCACTCATAACCATTAAGTGTATTGTTAAAGAAAAATCACCTAATCAGCCAAGCTATTGGAGTAGGTTGTGGGAGTACAAAGATTTGCAAAAAATTATGTCAAATAATATGGCAGCAGATAATCTTGAAGCCATAGTTCTTGAGAGTCATGGAATCACAAATTCTCCAATAGCAGTGAATGCAGATATTATTTCAAAAATGAGTCACCTTAAGTTGCTTGTGATTAATCATTTCAAGACTTTCGGAAGCCTTGACTATCTTTCCAATGAATTAGGATATCTTACTTTGAATAGATATCCTTATGAGAGTTTGCCTTCAATAGCCGAGTCAAGCAACTATGGAAAGGCACAAAGATCCTCCAACGGTGGGAAACCATTGTATTTTGAAGAATAA 1857 0.3759 MPSNAIMVSTASSSYLYDVFVSFRGEDTRNNFTAFLFEALRKNGIDAFKDDADLKKGESIAPELLQAIQASRIFIIVFSKDYSSSTWCLRELLQICNCIATSSRHVLPIFYDVHPSEVRKQSGYFEKAFAEHEERFREDKEKMEEVQRWKDALTQVANLSGWDIQNESQPAMIQQIVERIKNIIGPKFLSLPNDNLVGMQSRVEALTKLLRLDLVDEVRVVGISGMPGIGKSTVARALYENIANRYDYIRYIDDVSQIYRHSGQLGVQKRLLCLSSNEKDLEICNVSEGTCLVWNRLHNARALVIFDNVDQMEQLQIFSGNRDSMLRECLGGGSRIIIISNDEQILKTHGVDNVYQVQPLGSKDAYELFCKKAFRGIEIIARDYYEKVMRDVLSYAEGHPLAIQVLGSSMHSKSIAQWESTLAKLREHNNKDIMKVLRLGFDELDDTNKEIFLDIACFFNHKEVQKVTEILDFRGFHPECGLQDLADKSLITIKCIVKEKSPNQPSYWSRLWEYKDLQKIMSNNMAADNLEAIVLESHGITNSPIAVNADIISKMSHLKLLVINHFKTFGSLDYLSNELGYLTLNRYPYESLPSIAESSNYGKAQRSSNGGKPLYFEE 618
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr1678g00004 618 Gene3D - 184 355 IPR027417 -
Mupr1678g00004 618 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 179 455 IPR027417 -
Mupr1678g00004 618 PRINTS Disease resistance protein signature 553 569 - -
Mupr1678g00004 618 PRINTS Disease resistance protein signature 396 410 - -
Mupr1678g00004 618 PRINTS Disease resistance protein signature 220 235 - -
Mupr1678g00004 618 PRINTS Disease resistance protein signature 296 310 - -
Mupr1678g00004 618 Gene3D - 14 183 IPR035897 -
Mupr1678g00004 618 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 17 598 IPR044974 GO:0006952
Mupr1678g00004 618 ProSiteProfiles TIR domain profile. 15 184 IPR000157 GO:0007165
Mupr1678g00004 618 SUPERFAMILY Toll/Interleukin receptor TIR domain 9 162 IPR035897 -
Mupr1678g00004 618 FunFam Disease resistance protein (TIR-NBS-LRR class) 13 185 - -
Mupr1678g00004 618 SMART till_3 16 159 IPR000157 GO:0007165
Mupr1678g00004 618 Gene3D - 360 445 IPR042197 -
Mupr1678g00004 618 SUPERFAMILY "Winged helix" DNA-binding domain 432 519 IPR036390 -
Mupr1678g00004 618 Pfam TIR domain 17 182 IPR000157 GO:0007165
Mupr1678g00004 618 Pfam NB-ARC domain 212 433 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr1678g00004 Mupr-Chr1678 50124 52652 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr1678g00004 12 615 WRKY Transcription Factor Family AT4G12020 25.990 9.10e-52 191
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr1678g00004 - - gmx:100814717 709.523