Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr16783g00001 ATGTTTTTACTTTTGCCTTTTTGTCTGCCAGCTGTCAGTGATTATCGGCAATCTCTGCAGTTTCAGAACTTGAATGCAGAAAAACAAAATATAAAATTGGAGGTTATTAGAGGTGGCAGAACAGTACAAATATCGATATTTGATATTGTTGTTGGTGATCTAGTGCCCCTTAAAATAGGAGATCAGGTTCCTGCCGATGGAGTTGTAATCACTGGTCACTCTCTTGCCATTGATGAATCCAGTATGACTGGTGAAAGCAAGATTATTCACAAGGATCATAAAGCACCTTTTTTGATGTCTGGTTGCAAAGTAGCAGATGGAGTTGGTGCTATGCTGGTAACTGGTGTTGGTATAAATACTGAGTGGGGATTGTTGATGGCAAGTATCTCAGAGGATACTGGAGAAGAAACTCCATTACAGGTTCCCCCTACCCCAATCCAAAACCAAGAAAAGGCTGTTCGTTTGAATGGAGTAGCAACTTTTATTGGCATAGTTGGGCTTACTGTAGCTGTTTGTGTCCTTGCAGTCCTCTTGGGAAGATACTTCACCGGCCATACGAAAGATTTAGATGGAAAAGTACAATTTGTTGCTGGAAAGACTAATATTAGCTCAGTAGTAGATGGGGCCATCAAAATTTTTACAATCGCAAGCCATGCAGGTAACAATTGTAGTTGTTGCAGTGCCCGAAGGTCTACCTTTAGCAGTTACCTTAACGTGCGAAGGCTGTCAGCATGTGAAACTATGGGATCTGCTACAACAATTTGCAGTGATAAGACTGGAACTTTGACCTTAAATCAGATGACTGTAGTTGAGGCGTATGTTGGGAGGAATAAACTAAATCCACCAGATGAGTCGACAAAATTGCATCCGGAAGTTCTATCTCTGATAAATGAGGGCATTGCACAAAATACAACTGGCAATATTTTTGTGCCTAAGGATGGTGGAGAGGCGGAGGTGTCGGGATCTCCTACAGAGAAGGCAATTCTTTCTTGGGCAGTGAAGTTGGGGATGAATTTTGATTTTATTAGATCAAATTCAACAATTCTCCATGTCTTCCCCTTCAATTCTGAGAAAAAGCGAGGCGGTGTTGCTGTGAAACTGCCGGACTCTGCAGTGCATATACATTGGAAAGGAGCTGCGGAGATAGTTCTTGGAACATGTACTCAATATCTAGATTCTGATGGTCACTTGAAATCTATTGAAGAAGAGAAGGTATTCTTCAAGAAGGCTATCGAAGACATGGCTTCTCAGAGCTTGCGTTGTGTTGCCATTGCATACCGATCGTATGATTTAGACAAAATTCCATCTAACGAGGAGGAATTAGACCAGTGGTCCTTACCAGAACACGAGCTTGTCTTGCTTGCTATTGTTGGAATAAAGGATCCTTGTCGCCCTGGAGTCAAGGATGCTGTAAAAATATGCACTGAAGCTGGCGTTAAGGTACGCATGGTTACGGGTGACAATCTTCAAACAGCAAAAGCAATAGCTTTGGAGTGTGGAATACTGATGTCAACTGAAGATGCTGTTGAGCCAAATATAATTGAAGGAAAGACATTCCGCGAACTATCTGAAAAAGAAAGGGAACAAGTTGCACAACAAATAACAGTGATGGGGAGGTCTTCTCCTACTGACAAGCTGTTGCTCGTGCAAGCACTACGTAAAGGTGGCGAAGTTGTTGCTGTCACAGGAGATGGTACCAATGATGCTCCTGCGCTTCATGAGGCAGATATTGGTCTTTCTATGGGTATCCAAGGAACAGAAGTTGCAAAAGAAAGTTCAGATATTATAATCCTGGATGATAACTTTGCATCAGTAGTAAAGGTTGTTCGCTGGGGCCGTTCTGTATATGCAAATATTCAGAAATTTATTCAGTTCCAGCTCACTGTTAATGTTGCTGCTCTTGTAATAAATGTAGTGGCAGCAATATCATCTGGTGATGTTCCTTTAAATGCTGTTCAGCTTTTGTGGGTCAACCTTATCATGGACACACTTGGGGCTCTTGCATTGGCTACGGAACCACCAACAGACAACCTTATGCACCGATCCCCAGTAGGCCGAAGGGAACCTCTTATAACAAATATCATGTGGAGGAACTTGGTCGTACAGGCTCTCTATCAAGTCATTGTTCTTCTCGTTCTTAACTTTGGTGGTGAAAGTATTCTACATAATCAGGATTCTAAAACCCATACCATACAAGTCAAGAATACTCTAGTTTTCAATGCATTCGTCTTTTGCCAAATATTCAACGAGTTCAATGCTCGAAAACCAGAAGAGATGAATGTCTTCGAGGGAGTGACTAAGAATCGTCTCTTTATGGGAATTATTGGAGTGACCTTTGTGCTTCAGATAATCATCATCGAGTTCCTTGGAAAATTCACTGGGACAGTGAAGCTTGATTGGAAGCTGTGGCTTGCTTCCATTTGTATTGGGATTTTCAGTTGGCCTCTAGCGATAGTTGGAAAATTCATTCCAGTTCCCAAAACACCCCTGTCACGATATTTCTCCAAGCCATTCAGGAGATTCAACAAGTCCAAGTCCCTTGCAGATGCACCTAAATCTCAATAG 2565 0.4195 MFLLLPFCLPAVSDYRQSLQFQNLNAEKQNIKLEVIRGGRTVQISIFDIVVGDLVPLKIGDQVPADGVVITGHSLAIDESSMTGESKIIHKDHKAPFLMSGCKVADGVGAMLVTGVGINTEWGLLMASISEDTGEETPLQVPPTPIQNQEKAVRLNGVATFIGIVGLTVAVCVLAVLLGRYFTGHTKDLDGKVQFVAGKTNISSVVDGAIKIFTIASHAGNNCSCCSARRSTFSSYLNVRRLSACETMGSATTICSDKTGTLTLNQMTVVEAYVGRNKLNPPDESTKLHPEVLSLINEGIAQNTTGNIFVPKDGGEAEVSGSPTEKAILSWAVKLGMNFDFIRSNSTILHVFPFNSEKKRGGVAVKLPDSAVHIHWKGAAEIVLGTCTQYLDSDGHLKSIEEEKVFFKKAIEDMASQSLRCVAIAYRSYDLDKIPSNEEELDQWSLPEHELVLLAIVGIKDPCRPGVKDAVKICTEAGVKVRMVTGDNLQTAKAIALECGILMSTEDAVEPNIIEGKTFRELSEKEREQVAQQITVMGRSSPTDKLLLVQALRKGGEVVAVTGDGTNDAPALHEADIGLSMGIQGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALVINVVAAISSGDVPLNAVQLLWVNLIMDTLGALALATEPPTDNLMHRSPVGRREPLITNIMWRNLVVQALYQVIVLLVLNFGGESILHNQDSKTHTIQVKNTLVFNAFVFCQIFNEFNARKPEEMNVFEGVTKNRLFMGIIGVTFVLQIIIIEFLGKFTGTVKLDWKLWLASICIGIFSWPLAIVGKFIPVPKTPLSRYFSKPFRRFNKSKSLADAPKSQ 854
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr16783g00001 854 Pfam Cation transporting ATPase, C-terminus 647 822 IPR006068 -
Mupr16783g00001 854 SFLD C1.7: P-type atpase like 239 614 - -
Mupr16783g00001 854 FunFam Calcium-transporting ATPase 579 827 - -
Mupr16783g00001 854 FunFam Calcium-transporting ATPase 11 130 - -
Mupr16783g00001 854 Gene3D - 18 130 - -
Mupr16783g00001 854 PRINTS P-type cation-transporting ATPase superfamily signature 455 466 - -
Mupr16783g00001 854 PRINTS P-type cation-transporting ATPase superfamily signature 477 487 - -
Mupr16783g00001 854 PRINTS P-type cation-transporting ATPase superfamily signature 255 269 - -
Mupr16783g00001 854 PRINTS P-type cation-transporting ATPase superfamily signature 78 92 - -
Mupr16783g00001 854 PRINTS P-type cation-transporting ATPase superfamily signature 562 581 - -
Mupr16783g00001 854 PRINTS P-type cation-transporting ATPase superfamily signature 586 598 - -
Mupr16783g00001 854 NCBIfam calcium-translocating P-type ATPase, PMCA-type 9 825 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Mupr16783g00001 854 Gene3D - 252 607 IPR023214 -
Mupr16783g00001 854 FunFam Calcium-transporting ATPase 265 462 - -
Mupr16783g00001 854 NCBIfam HAD-IC family P-type ATPase 528 642 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Mupr16783g00001 854 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 262 459 IPR023299 GO:0000166
Mupr16783g00001 854 Pfam haloacid dehalogenase-like hydrolase 252 576 - -
Mupr16783g00001 854 SUPERFAMILY Calcium ATPase, transduction domain A 31 127 IPR008250 -
Mupr16783g00001 854 Gene3D - 265 462 IPR023299 GO:0000166
Mupr16783g00001 854 PANTHER CATION TRANSPORTING ATPASE 8 825 - -
Mupr16783g00001 854 Pfam E1-E2 ATPase 30 140 - -
Mupr16783g00001 854 ProSitePatterns E1-E2 ATPases phosphorylation site. 257 263 IPR018303 -
Mupr16783g00001 854 Gene3D - 11 814 - -
Mupr16783g00001 854 SUPERFAMILY Calcium ATPase, transmembrane domain M 5 825 IPR023298 -
Mupr16783g00001 854 SUPERFAMILY HAD-like 253 667 IPR036412 -
Mupr16783g00001 854 FunFam Calcium-transporting ATPase 455 607 - -
Mupr16783g00001 854 SFLD p-type atpase 239 614 IPR044492 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr16783g00001 Mupr-Chr16783 973 12975 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr16783g00001 3 846 Primary Pumps ATPases AT3G21180 74.416 0.0 1286
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr16783g00001 K01537 - gmx:100817367 1444.48