Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr16778g00001 ATGTGGTATACATTTGCTTGCATTCATTTCCTCTCTTTTCTCTTCAACAACTCGTCTGCACCAGTGAATATTATTGTAGGTTCTCATGTCTGGATTGAAGATCCAACACAAGCATGGATTGATGGAGAAGTTTCTAAAATCAACGGTGAAGAAGTTCATGTTCGCACCACAAATGGGAAAACAGTTGTCAAAAATATCTCAAAGGTTTTTCCCAAGGATAATGAAGCCCCTCCTGGAGGTGTAGATGACATGACAAAATTGTCATACTTGCATGAACCAGGAGTTCTGCACAACTTGGCAGCTAGATATGAACTCAATGAAATCTATACATATACTGGAAATATCCTGATTGCAATAAATCCTTTTCAAAGATTACCACATCTATATGATACTCACATGATGGAACAATATAAAGGAGCTGCATTTGGAGAATTGAGTCCCCATGTTTTTGCAGTTGCAGATGTTGCATACAGGGCGATGATTAATGAGGGAAAAAGCAACTCAATCCTGGTTAGCGGTGAGAGTGGGGCTGGAAAGACAGAGACAACAAAAATGCTTATGCGGTATCTTGCATACCTTGGGGGCCGATCTGGAGTAGAAGGACGGACAGTTGAACAACAAGTTCTAGAATCTAATCCAGTTCTTGAAGCATTTGGCAATGCCAAAACAGTTAGAAACAATAACTCAAGTCGTTTTGGTAAATTTGTTGAGATTCAATTTGACAACAAGGGAAGGATCTCTGGGGCAGCTATACGGACATATTTGCTTGAAAGGTCCCGTGTCTGTCAAATTTCAGATCCTGAAAGAAATTATCATTGCTTTTATCTTCTCTGTGCAGCACCAGCTGAGGAAAAAGAGAAGTATAAGCTGGGAAGTCCTAGCTCCTTCCATTACTTAAATCAATCCAACTGCTATGCACTGGATGGGGTGGATGACGCAGAGGAATATCTTGCAACTCGAAGGGCAATGGATGAGGCTATTTTTAGGGTTATTGCAGCAGTTTTGCACCTCGGAAATATTGAATTTGCAAAAGGAGAGGAGATTGACTCTTCTGTCATCAAGGATGAGAAGTCTAGGTTCCATCTTAATACGACTGCTGAACTTCTAAAGTGTGATTGTAAGAGCTTGGAAGATGCTTTGATCCAGCGTGTGATGGTAACGCCTGAGGAGGTTATTACAAGAACCCTTGATCCTGTGGCAGCTCTTGGTAGCAGGGATGCATTAGCTAAAACCATTTATTCCCGTTTGCTAGTGGAGAAGATTAACAATTCGATTGGGCAAGATCCAAGTTCAAAATCTATTATTGGAGTTCTTGATATCTATGGGTTTGAAAGTTTTAAGTTCAATAGTTTTGAGCAGTTCTGTATTAATTTTACCAATGAGAAGCTGCAACAACATTTTAATCAGCATGTCTTTAAAATGGAACAAGAAGAATACACCAAAGAAGAGATCAATTGGAGTTACATAGAGTTTGTTGACAACCAAGATGTTTTGGATCTAATTGAGAAGAAACCTGGAGGAATAATTGCACTTCTTGATGAAGCCTGTATGTTTCCAAAGTCTACACATGAAACATTTGCTCAGAAATTGTACCAGACATTCAAAAACAACAAGCGGTTCATCAAACCTAAACTTTCTCGGACCAGTTTTACCATATCCCATTATGCAGGGGAGGTGACATATCTGGCTGACATGTTTCTTGACAAAAACAAGGATTATGTGGTGGCAGAACATCAGGATCTGCTCACAGCCTCAAAATGCTCATTTGCAGCTGGTCTATTCCCCCCTTCTCCAGAGGAGTCTTCAAAATCATCAAAGTTCTCTTCAATAGGATCTCGCTTCAAGTTACAACTTCAATCTTTGATGGAGACCCTGAATTCAACTGAACCTCACTATATCAGATGTGTGAAGCCAAATAATGTTCTCAAGCCTGCTATTTTTGAAAATCTCAATATTATCCAACAATTGCGCTGTGGTGGTGTTCTTGAGGCAATTAGAATCAGCTGTGCTGGATATCCTACCAGACGGACCTTTTATGAATTTCTTAATCGATTTGGTGTTCTTGCCCCTGAAGTTCTGGATGGAAACTATGATGACAAGGTCGCATGCCAAATGATCCTGGATAAAATGGGTATGAAAGGCTATCAGATAGGCAAGACAAAGGTTTTCCTTAGAGCTGGCCAGATGGCTGAATTGGATACAAGAAGAGCAGAGGTTCTTGGAAATGCTGCTAGAATCATCCAGAGGCAAATACGTACCCATATTGCACGCAAGGAATTCATTGAATTGCGCCAAGCTGCAATTTGTTTGCAATCTAATTTGCGAGGAATATTGTCCCGGAAGCTCTACGAGCAGTTGCGACGAGAAGCAGCAGCTGTAAAAATAGAAAAGAACTTCAAAGGATACATTGCCAGGAAATCATACTTAACAGCACGTTCATCTGCAATTATACTACAAACAGGTTTAAGGGCTATGAAAGCTCGTGATGAATTTAGATTTAGAAAGCAAACGAAGGCTGCAATTTACATCCAGGCTCATTTGCGTCGGTTATTTGCATATTCATATTATAAAAGATTGCAAAAGGCTGCAGTTTTTACTCAATGTGGTTGGAGGAGAAGGGTTGCTAGAAGGGAACTTAGAATGCTTAAAATGGCTGCAAGAGAAACAGGGGCCCTCAAAGAAGCCAAGGACAAACTAGAAAAGCGTGTTGAAGAACTTACTTGGCGTTTGCAAATTGAGAAGCGTTTGAGAACTGATTTGGAAGAGGAAAAAGCACAAGAAGTTTCTAAGTTACAGGATGCTTTACATGCAATGCAAATACAAGTAGAAGAAGCAAACGCCAGGGTCATCAAAGAGCGTGAGGTGGCACGAAAGGCCATTGAAGAAGCACCTCCAGTTATTAAGGAGACTCCTGTTATAATTCAAGATACTGAAAAGATTAATTCTTTATTGGCCGAAGTCAATACTTTGAAGGAATCACTGCTATTGGAAAAAGAGGCTAAAGAAGAGGCCAGAAAAGCTCAGGCTGAGGCTGAAGCTAGAAATAAGGATCTGGTTAAAAAGGTTGAAGATTCTGACCGCAAGGTGGATCAACTTCAAGAATTGGTTCAGAGACTGGAGGAAAAAATTTCCAATTCAGAGTCAGAAAATCAAGTTCTTCGCCAGCAAGCATTGGCTGTCTCACCAACTGGAAAAGCTCTGTCTGCAAGACCTAGGACAGTGATTATTCAGAGAACACCTGAAAATGGGAATGCTCTAAATGGTGAAGCAAAAGTTGGATCGGATATGACTCTTGCTGTATCCAATGTGCGTGAGCCTGAGTCTGAGGGAAAACCACAAAAATTTCTCAATGAGAAGCAACAAGAAAACCAGGACTTATTGATTAAGTGCATATCACAAGATTTGGGATTTTCTGGGGGCAAACCTGTTGCTGCATGTGTCATATATAAATGCCTTCTTCACTGGAGGTCATTTGAAGTTGAAAGGACAAGTGTATTTGACCGTATCATTCAAACAATAGCTTCAGCTGTCGAGGCCCAGGATAATACTGATGTATTAGCCTATTGGTTGTCTAATACATCTACTTTATTGTTGCTACTCCAACGCACTCTTAAAGCTAGTGGAGCTGCTAGCTTAACACCACAACGGCGGAGAACATCATCATCTTCTCTGTTTGGAAGAATGTCTCAAGGGCTAAGGGCATCTCCCCAAAGTGCTGGATTGTCATTTCTAAATGGTCGAGGTCTTAATAGACTGGATGATTTACGACAAGTAGAAGCAAAATATCCAGCACTGCTGTTTAAGCAGCAGCTTACTGCCTTCCTTGAAAAAATATATGGAATGATAAGAGATAACCTAAAAAAGGAAATATCTCCATTACTTGGACTGTGTATACAGGCTCCAAGAAACTCACGTCAAAGTTTGGTAAAAGGACGCTCACATGCAAATGCAGTTGCTCAGCAAGCTTTAATTGCTCACTGGCAAAGTATTGTGAAAGGCTTAAACAATTATCTAAAGATAATGAAAGCAAACTATGCACCACCTTTCTTGGTCCGGAAAGTGTTCACTCAAATATTCTCATTCATCAATGTCCAATTATTCAATAGTCTTCTGTTGCGTCGTGAGTGTTGTTCATTCAGCAATGGGGAGTATGTAAAAACAGGTCTGGCTGAATTAGAGCAGTGGTGCGTCGAGGCAACGGAGGAGTATACTGGCTCTGCTTGGGAAGAACTGAAACATATCAGGCAGGCTGTTGGGTTCCTGGTTCTCAGTATACAACAGTTATACAGGATAAGTACAATGTACTGGGATGACAAATACGGCACTCACAGTGTGTCTACAGACGTTATAACAAGCATGAGAGCTATGATGTCTGAGGACTCCAATAATGCTGTCAGCACTTCTTTCCTATTAGATGATGACTCGAGCATTCCGTTTTCGGTGGATGACATTTCCAAATCAATGCAACAAGTAGAAGTAGCAGACGTGGATCCTCCTCCATTGATACGCGAAAACTCTGGATTTGGGTTCTTACTAGCACGGTCAGAGTGA 4551 0.4076 MWYTFACIHFLSFLFNNSSAPVNIIVGSHVWIEDPTQAWIDGEVSKINGEEVHVRTTNGKTVVKNISKVFPKDNEAPPGGVDDMTKLSYLHEPGVLHNLAARYELNEIYTYTGNILIAINPFQRLPHLYDTHMMEQYKGAAFGELSPHVFAVADVAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSGVEGRTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDNKGRISGAAIRTYLLERSRVCQISDPERNYHCFYLLCAAPAEEKEKYKLGSPSSFHYLNQSNCYALDGVDDAEEYLATRRAMDEAIFRVIAAVLHLGNIEFAKGEEIDSSVIKDEKSRFHLNTTAELLKCDCKSLEDALIQRVMVTPEEVITRTLDPVAALGSRDALAKTIYSRLLVEKINNSIGQDPSSKSIIGVLDIYGFESFKFNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTKEEINWSYIEFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFAQKLYQTFKNNKRFIKPKLSRTSFTISHYAGEVTYLADMFLDKNKDYVVAEHQDLLTASKCSFAAGLFPPSPEESSKSSKFSSIGSRFKLQLQSLMETLNSTEPHYIRCVKPNNVLKPAIFENLNIIQQLRCGGVLEAIRISCAGYPTRRTFYEFLNRFGVLAPEVLDGNYDDKVACQMILDKMGMKGYQIGKTKVFLRAGQMAELDTRRAEVLGNAARIIQRQIRTHIARKEFIELRQAAICLQSNLRGILSRKLYEQLRREAAAVKIEKNFKGYIARKSYLTARSSAIILQTGLRAMKARDEFRFRKQTKAAIYIQAHLRRLFAYSYYKRLQKAAVFTQCGWRRRVARRELRMLKMAARETGALKEAKDKLEKRVEELTWRLQIEKRLRTDLEEEKAQEVSKLQDALHAMQIQVEEANARVIKEREVARKAIEEAPPVIKETPVIIQDTEKINSLLAEVNTLKESLLLEKEAKEEARKAQAEAEARNKDLVKKVEDSDRKVDQLQELVQRLEEKISNSESENQVLRQQALAVSPTGKALSARPRTVIIQRTPENGNALNGEAKVGSDMTLAVSNVREPESEGKPQKFLNEKQQENQDLLIKCISQDLGFSGGKPVAACVIYKCLLHWRSFEVERTSVFDRIIQTIASAVEAQDNTDVLAYWLSNTSTLLLLLQRTLKASGAASLTPQRRRTSSSSLFGRMSQGLRASPQSAGLSFLNGRGLNRLDDLRQVEAKYPALLFKQQLTAFLEKIYGMIRDNLKKEISPLLGLCIQAPRNSRQSLVKGRSHANAVAQQALIAHWQSIVKGLNNYLKIMKANYAPPFLVRKVFTQIFSFINVQLFNSLLLRRECCSFSNGEYVKTGLAELEQWCVEATEEYTGSAWEELKHIRQAVGFLVLSIQQLYRISTMYWDDKYGTHSVSTDVITSMRAMMSEDSNNAVSTSFLLDDDSSIPFSVDDISKSMQQVEVADVDPPPLIRENSGFGFLLARSE 1516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr16778g00001 1516 Gene3D - 444 628 - -
Mupr16778g00001 1516 SMART MYSc_2a 73 738 IPR001609 GO:0003774|GO:0005524|GO:0016459
Mupr16778g00001 1516 FunFam Myosin XI D 672 735 - -
Mupr16778g00001 1516 Gene3D - 838 887 - -
Mupr16778g00001 1516 Gene3D - 790 837 - -
Mupr16778g00001 1516 Gene3D - 740 789 - -
Mupr16778g00001 1516 Gene3D - 672 735 - -
Mupr16778g00001 1516 ProSiteProfiles IQ motif profile. 742 766 IPR000048 GO:0005515
Mupr16778g00001 1516 SMART iq_5 787 809 IPR000048 GO:0005515
Mupr16778g00001 1516 SMART iq_5 810 832 IPR000048 GO:0005515
Mupr16778g00001 1516 SMART iq_5 835 857 IPR000048 GO:0005515
Mupr16778g00001 1516 SMART iq_5 858 880 IPR000048 GO:0005515
Mupr16778g00001 1516 SMART iq_5 739 761 IPR000048 GO:0005515
Mupr16778g00001 1516 SMART iq_5 762 784 IPR000048 GO:0005515
Mupr16778g00001 1516 FunFam unconventional myosin-Va 839 886 - -
Mupr16778g00001 1516 Coils Coil 984 1056 - -
Mupr16778g00001 1516 Pfam Myosin N-terminal SH3-like domain 26 63 IPR004009 GO:0003774|GO:0005524|GO:0016459
Mupr16778g00001 1516 Pfam IQ calmodulin-binding motif 764 783 IPR000048 GO:0005515
Mupr16778g00001 1516 Pfam IQ calmodulin-binding motif 742 760 IPR000048 GO:0005515
Mupr16778g00001 1516 CDD MyosinXI_CBD 1118 1482 IPR037975 GO:0007015
Mupr16778g00001 1516 ProSiteProfiles IQ motif profile. 788 814 IPR000048 GO:0005515
Mupr16778g00001 1516 Pfam DIL domain 1354 1428 IPR002710 -
Mupr16778g00001 1516 FunFam unconventional myosin-Va 791 838 - -
Mupr16778g00001 1516 FunFam unconventional myosin-Va 742 790 - -
Mupr16778g00001 1516 SMART DIL_2 1353 1441 IPR002710 -
Mupr16778g00001 1516 FunFam Myosin heavy chain 269 324 - -
Mupr16778g00001 1516 Coils Coil 882 923 - -
Mupr16778g00001 1516 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 25 74 IPR004009 GO:0003774|GO:0005524|GO:0016459
Mupr16778g00001 1516 Gene3D Myosin VI head, motor domain, U50 subdomain 325 606 - -
Mupr16778g00001 1516 PRINTS Myosin heavy chain signature 487 515 IPR001609 GO:0003774|GO:0005524|GO:0016459
Mupr16778g00001 1516 PRINTS Myosin heavy chain signature 434 462 IPR001609 GO:0003774|GO:0005524|GO:0016459
Mupr16778g00001 1516 PRINTS Myosin heavy chain signature 213 240 IPR001609 GO:0003774|GO:0005524|GO:0016459
Mupr16778g00001 1516 PRINTS Myosin heavy chain signature 166 191 IPR001609 GO:0003774|GO:0005524|GO:0016459
Mupr16778g00001 1516 PRINTS Myosin heavy chain signature 109 128 IPR001609 GO:0003774|GO:0005524|GO:0016459
Mupr16778g00001 1516 ProSiteProfiles Dilute domain profile. 1167 1493 IPR002710 -
Mupr16778g00001 1516 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 790 888 IPR027417 -
Mupr16778g00001 1516 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 50 790 IPR027417 -
Mupr16778g00001 1516 Gene3D - 269 324 - -
Mupr16778g00001 1516 Pfam Myosin head (motor domain) 81 725 IPR001609 GO:0003774|GO:0005524|GO:0016459
Mupr16778g00001 1516 ProSiteProfiles IQ motif profile. 859 888 IPR000048 GO:0005515
Mupr16778g00001 1516 ProSiteProfiles IQ motif profile. 763 792 IPR000048 GO:0005515
Mupr16778g00001 1516 ProSiteProfiles IQ motif profile. 836 862 IPR000048 GO:0005515
Mupr16778g00001 1516 Gene3D - 28 72 IPR008989 GO:0003774|GO:0005524|GO:0051015
Mupr16778g00001 1516 CDD MYSc_Myo11 93 725 IPR036018 -
Mupr16778g00001 1516 PANTHER MYOSIN 75 1447 - -
Mupr16778g00001 1516 ProSiteProfiles IQ motif profile. 811 840 IPR000048 GO:0005515
Mupr16778g00001 1516 Coils Coil 928 962 - -
Mupr16778g00001 1516 Gene3D Kinesin motor domain 82 667 IPR036961 -
Mupr16778g00001 1516 ProSiteProfiles Myosin motor domain profile. 79 737 IPR001609 GO:0003774|GO:0005524|GO:0016459
Mupr16778g00001 1516 FunFam Class V myosin 444 585 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr16778g00001 Mupr-Chr16778 366 12629 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr16778g00001 84 1516 Myosins gene family AT5G20490 81.079 0.0 2438
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr16778g00001 K10357 - gmx:100777802 2770.34