Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr16768g00001 GGAACGCCTGTGAACATCATTGTTGGATCACAGGTTTGGGTTGAGGATCCTGAGGATGCATGGATTGATGGTGAGGTGACAGAAATCAATGGCAGAAATGCCATCATCATTGCCACCAATGGGAAAACTGTGGTGGCAGAAATTTCAAGCATATACCCCAAAGATACAGAGGCACCACCTGCAGGAGTTGATGACATGACCAAGCTAGCATACCTTCATGAGCCAGGAGTCCTGCATAACCTTGCAATTCGTTTTTCTCTCAACGAGATATATACGTATACAGGGAATATCTTAATTGCAGTGAATCCTTTTCGAAGACTGCCACACTTGTATGACATCCATATGATGGAGCAGTACAAAGGAGCAGCATTTGGAGAGCTGAGTCCTCACCTTTTCGCTGTAGCAGACACATGTTACAGGGCAATGATAAATGATAATGGAAGTCAATCCATTTTGGTAAGTGGAGAGAGTGGAGCTGGTAAAACCGAGACAACGAAAATGCTCATGAGATATCTAGCATTCATGGGGGGTAGATCTGGTACAGAAGGAAGAACTGTTGAACAACAGGTTTTGGAGTCCAATCCAGTGTTGGAAGCATTTGGAAATGCCAAAACTGTCAAAAACAACAATTCAAGTCGTTTTGGTAAATTTGTTGAAATTCAATTTGACAAGAATGGGAAGATTTCTGGAGCTGCAATCCGTACATATCTCCTCGAAAGGTCACGCGTTTGTCAGGTCTCTGACCCAGAAAGAAACTATCATTGCTTTTACATGCTCTGTGCAGCACCACCAGAGGATGCTAAAAAGTACAAGTTAGGGGATCCAAGGCAATTCCACTATCTTAATCAATCAAATTGTTATGAAGTGTCAAATGTGGATGATGCAAAAGAATACTTGGAGACCAGAAATGCAATGGATATTGTAGGCATTAGCCAAGAAGAGCAGGATGCTATATTCCGTGTGGTAGCTGCAATCCTCCATCTTGGAAACATTGACTTTGTCAAAGGGAAAGAAGTTGATTCTTCCAAATTGAAAGATGATAAATCACTCTTCCACCTCCGAACGGCTGCAGAGTTATTCATGTCTGATGCGAAAGCACTAGAAGACTCACTTTGCAAGCGTGTCATTGTAACTCCTGATGGTAACATTACCAAACCCCTAGACCCAGATGCCGCTGCTTTGAGCCGAGATGCCTTGGCAAAGACTGTGTACTCCAAATTGATTGTAGACAAGATTAACAGTTCAATTGGCCAAGATTCCAATGCAGTAAGCATAATAGGAGTCCTTGATATTTATGGATTTGAAAGCTTCAAAATCAACAGTTTTGAGCAACTATGCATCAACCTAACGAATGAGAAGTTGCAACAACATTTTAATCAGCATGTATTCAAGATGGAGCAAGAAGAGTACACAAAGGAGGAAATCAATTGGAGCTATGTAGAATTTGTGGATAATCAGGATGTTCTTGATCTTATAGAGAAGAAACCAGGAGGAATAATTGCTCTTCTTGATGAAGCCTGCATGTTCCCCAAATCAACTCATGAGACTTTTGCACAAAAGATGTACCAGACATATAAAGGACACAAGCGCTTCAGCAAGCCAAAACTTGCTCGAACAGATTTCACAATTAACCATTATGCTGGAGATGTCACATATCAAGCAGATTATTTTCTTGATAAAAACAAAGATTATGTTGTAGCAGAGCATCAAGCTCTTTTATGTGCTTCCAAGTGCCCATTTGTTGCTAATCTTTTCCCTCCTTTACCAGAGGAGACATCAAAGCAATCAAAATTCTCTTCCATTGGTGCACAGTTTAAGGGAGTACTTGAGGCAATAAGGATTAGTTGTGCTGGATATCCAACAAAAAGAACATTTGAAGAGTTCCTAGATCGCTTTGGAATGCTAGCCCCTGATGTCCTTGATGGCTCTGATGAGAAAAAGGCATCTATTGCCATCTGTGATAAGATGGGCTTAAAAGGCTACCAAATGGGGAAAGCAAAGGTATTTCTTAGAGCTGGTCAGATGGCTGAATTAGATGCACGAAGAGCTGAAGTCTTAGCTAAAGCGGCTAAACGCATACAGAGACAAATCCGAACACATTTAACCAGAAAGGAATTCATCACCCTGAGAAAGGCCACAATTCATATCCAGAAGATTTGGAGAGCTAAACTTGCACGTAAACTCTATGAGAATATGAGGAGGGAAGCAGCTTCTATCAGGATACAGAAACATGTGCGTGCACACAGAGCAAGAATGGATTATGCATCGTTACAAGCATCAGCTATAGTTATTCAATCAGGGTTGAGAGCATTAGCAGCACGTAATGAATATAGGTACAGAAGAAGAACAAAGGCTTCAACAAAAGTTCAGACACAATGGAGAAAAGTCCGAGCTCTTTTTGATTACAAACAGAAGAAGAAAGCAACTATTACACTTCAATGTCTTTGGAGAGCTAGAGTAGCAAGGAAAGAGCTCAGAAAGCTTCGGATGAATTTTATGCCAATGCTTTTGGCAACTGGCATATCTGCTAGAAAAGAAAAGTGTTCCAAAATTAGAGGCATGGCTGCAAGGGAAACTGGGGCACTTAAGGAAGCAAAGGACAAGTTGGAGAAGCGTGTTGAGGAGCTTACATGGAGACTAGATATAGAAAAGCATATGAGGACGGATCTTGAAGAAGCTAAAGGGCAAGAGATTGCAAAATTGCAAAATGCTTTACAAGAAATGCAAGCTCAGCTAGATGAAGCCCATGCTGCAATTATACATGAGAGAGAAGCAGCAAAAATAGCAATTGAACAAGCACCACCAGTAATTAAAGAGGTACCTGTTGTGGACGACACCAAGCTAGAGTTACTGACAAATAAAAATGAGGAGCTGGAG 2877 0.4112 GTPVNIIVGSQVWVEDPEDAWIDGEVTEINGRNAIIIATNGKTVVAEISSIYPKDTEAPPAGVDDMTKLAYLHEPGVLHNLAIRFSLNEIYTYTGNILIAVNPFRRLPHLYDIHMMEQYKGAAFGELSPHLFAVADTCYRAMINDNGSQSILVSGESGAGKTETTKMLMRYLAFMGGRSGTEGRTVEQQVLESNPVLEAFGNAKTVKNNNSSRFGKFVEIQFDKNGKISGAAIRTYLLERSRVCQVSDPERNYHCFYMLCAAPPEDAKKYKLGDPRQFHYLNQSNCYEVSNVDDAKEYLETRNAMDIVGISQEEQDAIFRVVAAILHLGNIDFVKGKEVDSSKLKDDKSLFHLRTAAELFMSDAKALEDSLCKRVIVTPDGNITKPLDPDAAALSRDALAKTVYSKLIVDKINSSIGQDSNAVSIIGVLDIYGFESFKINSFEQLCINLTNEKLQQHFNQHVFKMEQEEYTKEEINWSYVEFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFAQKMYQTYKGHKRFSKPKLARTDFTINHYAGDVTYQADYFLDKNKDYVVAEHQALLCASKCPFVANLFPPLPEETSKQSKFSSIGAQFKGVLEAIRISCAGYPTKRTFEEFLDRFGMLAPDVLDGSDEKKASIAICDKMGLKGYQMGKAKVFLRAGQMAELDARRAEVLAKAAKRIQRQIRTHLTRKEFITLRKATIHIQKIWRAKLARKLYENMRREAASIRIQKHVRAHRARMDYASLQASAIVIQSGLRALAARNEYRYRRRTKASTKVQTQWRKVRALFDYKQKKKATITLQCLWRARVARKELRKLRMNFMPMLLATGISARKEKCSKIRGMAARETGALKEAKDKLEKRVEELTWRLDIEKHMRTDLEEAKGQEIAKLQNALQEMQAQLDEAHAAIIHEREAAKIAIEQAPPVIKEVPVVDDTKLELLTNKNEELE 959
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr16768g00001 959 Gene3D Kinesin motor domain 64 434 IPR036961 -
Mupr16768g00001 959 ProSiteProfiles IQ motif profile. 709 738 IPR000048 GO:0005515
Mupr16768g00001 959 ProSiteProfiles IQ motif profile. 805 834 IPR000048 GO:0005515
Mupr16768g00001 959 Coils Coil 859 925 - -
Mupr16768g00001 959 FunFam unconventional myosin-Va 737 784 - -
Mupr16768g00001 959 Pfam Myosin N-terminal SH3-like domain 9 46 IPR004009 GO:0003774|GO:0005524|GO:0016459
Mupr16768g00001 959 FunFam Class V myosin 435 574 - -
Mupr16768g00001 959 FunFam unconventional myosin-Va 688 736 - -
Mupr16768g00001 959 PRINTS Myosin heavy chain signature 195 222 IPR001609 GO:0003774|GO:0005524|GO:0016459
Mupr16768g00001 959 PRINTS Myosin heavy chain signature 91 110 IPR001609 GO:0003774|GO:0005524|GO:0016459
Mupr16768g00001 959 PRINTS Myosin heavy chain signature 148 173 IPR001609 GO:0003774|GO:0005524|GO:0016459
Mupr16768g00001 959 PRINTS Myosin heavy chain signature 425 453 IPR001609 GO:0003774|GO:0005524|GO:0016459
Mupr16768g00001 959 PRINTS Myosin heavy chain signature 478 506 IPR001609 GO:0003774|GO:0005524|GO:0016459
Mupr16768g00001 959 FunFam unconventional myosin-Va 785 831 - -
Mupr16768g00001 959 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 35 737 IPR027417 -
Mupr16768g00001 959 Gene3D Myosin VI head, motor domain, U50 subdomain 311 597 - -
Mupr16768g00001 959 ProSiteProfiles IQ motif profile. 757 786 IPR000048 GO:0005515
Mupr16768g00001 959 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 7 56 IPR004009 GO:0003774|GO:0005524|GO:0016459
Mupr16768g00001 959 ProSiteProfiles Myosin motor domain profile. 61 611 IPR001609 GO:0003774|GO:0005524|GO:0016459
Mupr16768g00001 959 SMART MYSc_2a 55 684 IPR001609 GO:0003774|GO:0005524|GO:0016459
Mupr16768g00001 959 Gene3D - 737 784 - -
Mupr16768g00001 959 Gene3D - 684 736 - -
Mupr16768g00001 959 Gene3D - 785 831 - -
Mupr16768g00001 959 Gene3D - 619 681 - -
Mupr16768g00001 959 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 736 831 IPR027417 -
Mupr16768g00001 959 Gene3D - 251 309 - -
Mupr16768g00001 959 SMART iq_5 685 707 IPR000048 GO:0005515
Mupr16768g00001 959 SMART iq_5 781 801 IPR000048 GO:0005515
Mupr16768g00001 959 SMART iq_5 756 778 IPR000048 GO:0005515
Mupr16768g00001 959 SMART iq_5 804 826 IPR000048 GO:0005515
Mupr16768g00001 959 SMART iq_5 708 730 IPR000048 GO:0005515
Mupr16768g00001 959 SMART iq_5 733 755 IPR000048 GO:0005515
Mupr16768g00001 959 ProSiteProfiles Myosin motor domain profile. 612 683 IPR001609 GO:0003774|GO:0005524|GO:0016459
Mupr16768g00001 959 Pfam Myosin head (motor domain) 63 596 IPR001609 GO:0003774|GO:0005524|GO:0016459
Mupr16768g00001 959 Pfam Myosin head (motor domain) 604 671 IPR001609 GO:0003774|GO:0005524|GO:0016459
Mupr16768g00001 959 Gene3D - 435 611 - -
Mupr16768g00001 959 ProSiteProfiles IQ motif profile. 734 760 IPR000048 GO:0005515
Mupr16768g00001 959 FunFam Myosin heavy chain 251 306 - -
Mupr16768g00001 959 Pfam IQ calmodulin-binding motif 736 754 IPR000048 GO:0005515
Mupr16768g00001 959 Pfam IQ calmodulin-binding motif 710 729 IPR000048 GO:0005515
Mupr16768g00001 959 Pfam IQ calmodulin-binding motif 688 706 IPR000048 GO:0005515
Mupr16768g00001 959 Pfam IQ calmodulin-binding motif 759 778 IPR000048 GO:0005515
Mupr16768g00001 959 Pfam IQ calmodulin-binding motif 807 826 IPR000048 GO:0005515
Mupr16768g00001 959 PANTHER MYOSIN 53 608 - -
Mupr16768g00001 959 CDD MYSc_Myo11 75 671 IPR036018 -
Mupr16768g00001 959 ProSiteProfiles IQ motif profile. 686 713 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr16768g00001 Mupr-Chr16768 9087 15570 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr16768g00001 115 959 Myosins gene family AT2G31900 76.345 0.0 1397
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr16768g00001 K10357 - gmx:100817933 1712.58