Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr16767g00001 ATGGCTCATGAGGACTGGGATCTCTTTGCCATAGTTAGAAGTTGCAAAGCTGCCACCTTTACTGCCACAACAAACATAGAAACCCCACCCACCACCACCACCTCCACCACCACTCTTGAATCCCCTGACACTCCCTCTTGCTTGGACGCTTTCACTGTTAACCAAGAAAATGGCTCATTCTCTTTTCCCAATCTTGTGCAACCAACAACCAATGGGTTCCAAGAGCTTCACCAATTGTTAAGGAACTTCAACCCCACCACCAGCACCATTACTAGCACTATCACTAGTGGCCTTGGCATCAATCCCAATTCCACTTTTTCTGACGTTGCGGAATTCATTGGACAACAGCAGATACAACAATGTCACCACCATCATCTCGATCCTGCTCCCACAAATCACACCTCCATTAGAACACCCTCCACTAGTACTAGTTTTGACAGATTCCAAAACACCCACCACCAACAACAGCACCCCCAAACCCCAGACCAACATCAACAACAGCAAAATCAGCCACCCCAAACAAGTCCTATCCTTTCACCAAACACACAGCCACAGCCACCCAGATCAAGAAAAAGAAAAAGCCAACAGAAGAAAATGGTGTGCCATGTAACCGCAGACAACCTCTCATCAGACTTGTGGGCATGGAGAAAATATGGACAAAAACCCATCAAAGGTTCTCCATATCCAAGATGCAGTAGCTGCAAAGGCTGCGCCGCGAGAAAGCAAGTAGAGCGAAGCACCACCGAACCCAACACCTTCATCGTGACCTACACCGGCGACCACAAGCACGCCAAACCCGTCCACCGGAATTCCCTCGCCGGCAGCACCCGGACCAAGCCATCCCCGACCCCTTTACCCGAAACCAAACTAACCGGACCTTGCATAACTGAAGAAAACGCATGCTCATCAACTTCCGAGCTTTCTCCCATGCTTTTAAACTCCGGCACGCCGGAAAACGAGGCAAAGATCGCCGTCGGCGAACCCGATTCACCCTCCGAAAACGATGACAACGACGTTTTGATACCCAACACGGGTGCCATGTCGGACGCTGTTCTCTTGGGGTTGACTAACATTGACCGCGATGGAGGTTACGCTAATGCTTTGGATCCGAATAGCACTTCTGGGTCGGTGCAATCCAGGACCGACCCGTTTTCCAACCCAGTGTAG 1167 0.5039 MAHEDWDLFAIVRSCKAATFTATTNIETPPTTTTSTTTLESPDTPSCLDAFTVNQENGSFSFPNLVQPTTNGFQELHQLLRNFNPTTSTITSTITSGLGINPNSTFSDVAEFIGQQQIQQCHHHHLDPAPTNHTSIRTPSTSTSFDRFQNTHHQQQHPQTPDQHQQQQNQPPQTSPILSPNTQPQPPRSRKRKSQQKKMVCHVTADNLSSDLWAWRKYGQKPIKGSPYPRCSSCKGCAARKQVERSTTEPNTFIVTYTGDHKHAKPVHRNSLAGSTRTKPSPTPLPETKLTGPCITEENACSSTSELSPMLLNSGTPENEAKIAVGEPDSPSENDDNDVLIPNTGAMSDAVLLGLTNIDRDGGYANALDPNSTSGSVQSRTDPFSNPV 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr16767g00001 388 MobiDBLite consensus disorder prediction 262 293 - -
Mupr16767g00001 388 MobiDBLite consensus disorder prediction 367 388 - -
Mupr16767g00001 388 MobiDBLite consensus disorder prediction 321 343 - -
Mupr16767g00001 388 SMART WRKY_cls 209 265 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mupr16767g00001 388 Pfam WRKY DNA -binding domain 211 263 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mupr16767g00001 388 MobiDBLite consensus disorder prediction 360 388 - -
Mupr16767g00001 388 ProSiteProfiles WRKY domain profile. 204 266 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mupr16767g00001 388 SUPERFAMILY WRKY DNA-binding domain 204 266 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mupr16767g00001 388 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 5 287 IPR044810 GO:0003700
Mupr16767g00001 388 MobiDBLite consensus disorder prediction 119 201 - -
Mupr16767g00001 388 MobiDBLite consensus disorder prediction 131 176 - -
Mupr16767g00001 388 Gene3D WRKY domain 192 259 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mupr16767g00001 388 MobiDBLite consensus disorder prediction 271 285 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr16767g00001 Mupr-Chr16767 9108 10565 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr16767g00001 188 307 WRKY Transcription Factor Family AT5G52830 65.354 3.50e-48 165
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Mupr16767g00001 WRKY 4.5e-17 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr16767g00001 - - gmx:100796829 475.322