Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr16757g00001 ATGGCTGCGGTGGCATGGGAAGCAGGGAAGCCACTGTCAGTGGAAACAATAGAGGTGGCACAACCGCAGAAAGGTGAAGTGCGTTTGAAGATCCTCTTCAACTCCCTTTGCCGTACTGATGTTTACTGGTGGGATGCTAAGGGCCAGAATCCGCTGTTCCCTCGGATCTTAGGTCATGAAGCTTCAGGGATTGTGGAGAGCGTGGGCGAGGGTGTGACCCATCTGAAACCAGGTGACCATGCACTCCCAATATTCACTGGGGAGTGTGGGGAATGCACTTATTGCAAGTCAGAGGAGAGCAACCTATGTGAGTTACTCAGAATCAACACTGACAGGGGAGTTATGCTCAGTGATGGCAAAACAAGGTTCTCCAAAAATGGACAACCCATTTACCACTTTGTGGGAACCTCCACATTCAGTGAATACACTGTTCTCCATGCTGGATGTGTTGCCAAGATCAACCCTGCTGCCCCTCTTGACAAAGTTTGTGTTGTTAGTTGCGGATTTTGCACAGGTTTTGGTGCTACTGTAAATGTTGCTAAACCAAAGCCTAATAATACTGTTGCTGTCTTTGGATTAGGAGCTGTTGGTCTTGCTGCTGCTGAAGGGGCAAGAGTTTCTGGTGCATCTAGAATCATCGGGGTTGATTTAATTACCAGTCGATTTGACCAAGCCAAACAATTTGGGGTCACTGACTTTGTGAACCCGAAAGATCATAACAAACCAGTACAAGAGGTCATTGCTGAGATGACTAATGGAGGAGTAGATCGTGCTATCGAATGCACTGGGAGCATCAATGCTTCGATCTCAGCATTTGAATGTACTCATGATGGTTGGGGTGTTGCTGTACTTGTGAGTGTGCCAAAGAAGGATGTTGAATTCAAAACTCATCCTATGAATTTCATGGAAGGGAGAACTCTCAAGGGTACCTTCTATGGCCACTACAAACCCCGCACTGATATTCCTTCTGTTGTGGAGAAGTACCTAAACAAGGAGCTGGAACTGGACAAATTTATCACTCACTCAGTGCCATTCTCGGAGATCAACACAGCATTTGATTTAATGCTGAAAGGGGAGGGCATAAGGTGCCTCATTCGCATGGAAGAAATAAATTTGGCATGTAATTCAGTTATTGGATTGGTGCTGTATGAGTGTGAATGGGGTCATGACTTTCTTGGTCATTTTCGTGGCTTTGTTATGACAGATGCTGTC 1212 0.4596 MAAVAWEAGKPLSVETIEVAQPQKGEVRLKILFNSLCRTDVYWWDAKGQNPLFPRILGHEASGIVESVGEGVTHLKPGDHALPIFTGECGECTYCKSEESNLCELLRINTDRGVMLSDGKTRFSKNGQPIYHFVGTSTFSEYTVLHAGCVAKINPAAPLDKVCVVSCGFCTGFGATVNVAKPKPNNTVAVFGLGAVGLAAAEGARVSGASRIIGVDLITSRFDQAKQFGVTDFVNPKDHNKPVQEVIAEMTNGGVDRAIECTGSINASISAFECTHDGWGVAVLVSVPKKDVEFKTHPMNFMEGRTLKGTFYGHYKPRTDIPSVVEKYLNKELELDKFITHSVPFSEINTAFDLMLKGEGIRCLIRMEEINLACNSVIGLVLYECEWGHDFLGHFRGFVMTDAV 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr16757g00001 404 CDD alcohol_DH_plants 2 366 - -
Mupr16757g00001 404 FunFam Alcohol dehydrogenase 6 3 186 - -
Mupr16757g00001 404 SUPERFAMILY GroES-like 2 176 IPR011032 -
Mupr16757g00001 404 FunFam Alcohol dehydrogenase class-P 172 310 - -
Mupr16757g00001 404 Pfam Zinc-binding dehydrogenase 195 322 IPR013149 -
Mupr16757g00001 404 Pfam Alcohol dehydrogenase GroES-like domain 25 152 IPR013154 -
Mupr16757g00001 404 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 158 331 IPR036291 -
Mupr16757g00001 404 SUPERFAMILY GroES-like 317 366 IPR011032 -
Mupr16757g00001 404 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 58 72 IPR002328 GO:0008270|GO:0016491
Mupr16757g00001 404 PANTHER ALCOHOL DEHYDROGENASE 2 365 - -
Mupr16757g00001 404 Gene3D - 172 310 - -
Mupr16757g00001 404 Gene3D - 8 359 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr16757g00001 Mupr-Chr16757 3565 8271 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr16757g00001 4 359 Monolignol Biosynthesis Gene Families AT1G72680 25.549 9.84e-15 73.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr16757g00001 K18857 - gmx:100775490 704.516