Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr16754g00001 ATGGGTGGTGAAAGTGATCACAACAGTTCTGTTTCCATGGTTAGGAAGAACAGGAAGAATGGCTCTTTTAGGTCCATTTTCATGCATGCTGATGGCCTAGACTGGTTTCTCATGATTTTCGGTCTGCTTGGGGCCATTGGTGATGGCTTAGGCACCCCTTTGGTGTTGTTTGTCACCAGCAAAATTATGAACAATATTGGTGATTTTTCTGGCAACATAGGCACCACTTTTGTCCATAGCATCAATAAGAATGCTGTGGTTTTGTTATTTCTGGCCGGTGGGTCTTTCGTTGCTTGTTTCCTAGAGGGCTATTGTTGGACAAGAACAGGTGAAAGACAAGCTGCTAGAATGAGAGTCAAGTACCTAAAAGCAGTGTTAAGGCAAGAAGTAGCATACTTCGATTTGCATGTCACAAGCACATCTGAAGTCATCACAAGCGTCTCTAATGACAGCCTTGTAATTCAAGATGTTCTTAGTGAAAAGGTTCCAAATTTTTTGATGAATGCCTCTATGTTTGTTGGGAGCTACATAGTGGCTTTTGCATTACTATGGAGGTTGGCCATTGTGGGGTTCCCTTTTGTGGCTCTACTTGTGATCCCTGGTTTTATGTATGGGAGGACACTAATGGGGTTGGCTAGCAAGATAAGAGAAGAGTACAACAAGGCTGGTACAATAGCAGAACAGGCAATATCTTCCATCAGAACCGTTTATTCCTTTGTGGGGGAAAGCAAGACCATTGATGCTTTCTCTGATGCTCTACAAGGTTCTGTTGAGTTGGGACTGAGACAAGGCTTAGCAAAAGGCTTAGCTATTGGAAGCAATGGTGTTGTCTTTGCTATATGGGCTTTCATGTCCTACTATGGTAGCAGATTGGTCATGTACCATGGTGCCAAAGGTGGGACTGTATTTGCTGTTGGAGCAGCCATAGCTCTTGGAGGATTAGCACTAGGTGCTGGTTTATCGAACGTGAAGTACTTCTCAGAGGCAAGTACAGCAGGAGAACGCATAATGGAGGTGATAAAAAGGGTTCCGAAGATTGATTCAGAGAACATGGGAGGGGAGATTCTGGAGAAGGTTTCAGGGGAAGTTGAATTCGAGCACGTGAACTTCGTGTACCCGTCGAGGCCAGACAGCGTTGTTCTGAACGATTTCTGTCTGAGGGTTCCAGCAGGGAAGACAGTGGCCCTTGTCGGAGGGAGTGGGTCTGGAAAATCCACTGTGATATCACTTTTGCAAAGATTTTATGACCCAATTGAGGGAGAGATACGTCTTGATGGTGTGGCTATTCACAGGTTGCAACTCAAGTGGTTGAGATCTCAGATGGGTTTGGTGAGCCAAGAACCTGCACTCTTTGCAACCACCATTAAAGAGAATGTCCTCTTTGGAAGAGAGGATGCCACTGAGGAAGAGGTTCTCCAGGCTGCTAAAGCCTCCAATGCTCATAATTTCATCTCACAGTTGCCTCAGGGATATCATACCCAGGTTGGGGAGAGGGGAGTTCAAATGTCAGGGGGACAGAAACAAAGAATTGCGATAGCACGAGCAATAATAAAAAAGCCACGAATTCTTTTGCTTGATGAAGCAACAAGTGCACTAGATTCTGAATCTGAAAGAGTTGTGCAAGAAGCATTAGATAATGCAGCAGTAGGGCGCACCACGATTATCATTGCTCATAGATTATCCACTGTACGAAATGCAGATGTGATTGGTGTGGTGCAGAATGGGAAGATCATGGAAATGGGGTCACACCATGAACTAATCCAAAATGACAATGGTCTTTACACCTCACTTGTTCGTCTTCAACAAGCCAAAAATGAAAAGGAAGACACCCCATTTCACCCTCCTCCTCCTTCTTCTTCATCCATATCAAACAAAGATAACCACAACACAAGTAGTCGCAGGCTCTCCTTCGTGAGTCGTTCTAGCTCTGCCAACTCAATGCCTCGTGTTGGTGGTGACGATGTTGTTGAAGAGGTTGTCGAAAATAAGCTACCACTTCCCTCATTTCGTAGGTTGCTAGCATTGAACATTCCCGAGTGGAAACAAGCATGTTTAGGGTGTTTGAATGCAGTGTTGTTTGGTGCAATTCAACCAGTTTATGCATTTGCAATGGGATCGGTCATATCTGTTTATTTTCTCGCGGACCATGATGAGATCAAGAAGAAAACTAGGATCTATTCACTTTGTTTCCTAGGCTTGGCTGTGTTCTCCTTGGTGGTTAATATCCTCCAACATTATAACTTTGCTTACATGGGAGAGTACTTAACTAAAAGGGTTAGAGAAAGAATGCTTTCCAAGATACTCACTTTTGAAGTTGGATGGTTCGATCAAGATGAAAATTCCACAGGTGCTGTTTGCTCTAGACTTGCCAAAGAAGCCAATGTGGTAAGGTCTTTAGTGGGAGACAGATTGGCTCTGGTGGTACAAACAATTTCTGCTGTGGTAATAGCTTTTACTATGGGCCTAATCATTGCATGGAGGTTGGCCATTGTTATGATAGCAGTTCAGCCCATTATCATAGCCTGCTTCTACACAAGACGTGTCCTTCTTAAGAACATGTCTAGTAAGGCCATCAAGGCCCAAGATGAAAGTAGCAAGATAGCTGCGGAAGCCGTTTCCAACCTTAGAACCATCACGGCCTTTTCTTCCCAAGATAGAATCCTCAAAATGCTGGAAAAGGCCCAAGAAGGCCCAAGTCGTGAAAGCATTCGACAATCTTGGTTTGCAGGTGTTGGTCTTGCATGTTCTCAAAGCCTGACATTTTGCACTTGGGCTTTGGACTTTTGGTATGGAGGGAAGCTTGTGTTTCATGGGTATATCAATGCCAAGGCACTATTTGAGACTTTCATGATCTTAGTGAGCACGGGTAGGGTCATCGCAGATGCTGGTAGTATGACCAATGACCTTGCCAAAGGTGCTGATGCTGTGGGCTCAGTTTTTGCAATCTTGGACAGGTACACAAAAATTGAGCCTGATGACATAGATGGGTACAAGCCTGAGAATTTAACAGGAAAGATTGAACTTCATGATGTCCATTTTGCATACCCTGCTAGGCCCAATGTGATGATCTTTCAAGGCTTCTCAATCAAAATTGATGCAGGCAAATCAACAGCATTAGTGGGACAAAGTGGGTCTGGCAAGTCAACAATAATTGGCTTAATAGAGAGATTCTATGACCCATTAAAAGGGACTGTGACCATAGATGGTAGAGACATAAAATCATATCACCTTAGGTCACTAAGGAAGCACATTGCTCTTGTAAGCCAAGAACCAACACTTTTTGGTGGGACCATAAGGGAAAACATTGCATATGGAGCATCTAATAATAAGATTGATGAAACTGAGATCATAGAAGCATCAAGGGCAGCCAATGCTCATGATTTCATTGCAAGCCTAAAGGACGGTTATGACACATGGTGTGGGGATAGAGGATTGCAACTCTCTGGTGGTCAAAAACAAAGAATTGCAATAGCTAGGGCCATATTGAAGAACCCAGAGGTGTTATTGTTGGATGAAGCCACAAGTGCCCTTGATAGCCAGTCAGAGAAATTGGTGCAAGGTGCCCTAGAAAGGGTGATGGTAGGGAGGACTAGTGTGGTGGTGGCCCACAGGTTAAGCACCATACAAAATTGTGATCTAATTGCTGTGCTAGATAAGGGAAAGGTGGTGGAGAAAGGGACCCACTCCTCTTTGTTGGCTGAGGGACCAAGTGGAGCTTATTACTCTTTGGTAAGTCTACAAAGAAGACCAACCAAACATGATTGTTAA 3768 0.4403 MGGESDHNSSVSMVRKNRKNGSFRSIFMHADGLDWFLMIFGLLGAIGDGLGTPLVLFVTSKIMNNIGDFSGNIGTTFVHSINKNAVVLLFLAGGSFVACFLEGYCWTRTGERQAARMRVKYLKAVLRQEVAYFDLHVTSTSEVITSVSNDSLVIQDVLSEKVPNFLMNASMFVGSYIVAFALLWRLAIVGFPFVALLVIPGFMYGRTLMGLASKIREEYNKAGTIAEQAISSIRTVYSFVGESKTIDAFSDALQGSVELGLRQGLAKGLAIGSNGVVFAIWAFMSYYGSRLVMYHGAKGGTVFAVGAAIALGGLALGAGLSNVKYFSEASTAGERIMEVIKRVPKIDSENMGGEILEKVSGEVEFEHVNFVYPSRPDSVVLNDFCLRVPAGKTVALVGGSGSGKSTVISLLQRFYDPIEGEIRLDGVAIHRLQLKWLRSQMGLVSQEPALFATTIKENVLFGREDATEEEVLQAAKASNAHNFISQLPQGYHTQVGERGVQMSGGQKQRIAIARAIIKKPRILLLDEATSALDSESERVVQEALDNAAVGRTTIIIAHRLSTVRNADVIGVVQNGKIMEMGSHHELIQNDNGLYTSLVRLQQAKNEKEDTPFHPPPPSSSSISNKDNHNTSSRRLSFVSRSSSANSMPRVGGDDVVEEVVENKLPLPSFRRLLALNIPEWKQACLGCLNAVLFGAIQPVYAFAMGSVISVYFLADHDEIKKKTRIYSLCFLGLAVFSLVVNILQHYNFAYMGEYLTKRVRERMLSKILTFEVGWFDQDENSTGAVCSRLAKEANVVRSLVGDRLALVVQTISAVVIAFTMGLIIAWRLAIVMIAVQPIIIACFYTRRVLLKNMSSKAIKAQDESSKIAAEAVSNLRTITAFSSQDRILKMLEKAQEGPSRESIRQSWFAGVGLACSQSLTFCTWALDFWYGGKLVFHGYINAKALFETFMILVSTGRVIADAGSMTNDLAKGADAVGSVFAILDRYTKIEPDDIDGYKPENLTGKIELHDVHFAYPARPNVMIFQGFSIKIDAGKSTALVGQSGSGKSTIIGLIERFYDPLKGTVTIDGRDIKSYHLRSLRKHIALVSQEPTLFGGTIRENIAYGASNNKIDETEIIEASRAANAHDFIASLKDGYDTWCGDRGLQLSGGQKQRIAIARAILKNPEVLLLDEATSALDSQSEKLVQGALERVMVGRTSVVVAHRLSTIQNCDLIAVLDKGKVVEKGTHSSLLAEGPSGAYYSLVSLQRRPTKHDC 1255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr16754g00001 1255 MobiDBLite consensus disorder prediction 604 650 - -
Mupr16754g00001 1255 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 363 599 IPR003439 GO:0005524
Mupr16754g00001 1255 FunFam ABC transporter B family member 4 353 608 - -
Mupr16754g00001 1255 PANTHER ABC TRANSPORTER B FAMILY 14 736 IPR039421 -
Mupr16754g00001 1255 FunFam Putative ABC transporter B family member 8 650 994 - -
Mupr16754g00001 1255 MobiDBLite consensus disorder prediction 619 648 - -
Mupr16754g00001 1255 Pfam ABC transporter transmembrane region 38 305 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mupr16754g00001 1255 Pfam ABC transporter transmembrane region 685 953 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mupr16754g00001 1255 ProSitePatterns ABC transporters family signature. 1147 1161 IPR017871 GO:0005524|GO:0016887
Mupr16754g00001 1255 SUPERFAMILY ABC transporter transmembrane region 665 990 IPR036640 GO:0005524|GO:0016020
Mupr16754g00001 1255 CDD ABC_6TM_Pgp_ABCB1_D1_like 38 336 - -
Mupr16754g00001 1255 Pfam ABC transporter 381 530 IPR003439 GO:0005524
Mupr16754g00001 1255 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1006 1244 IPR003439 GO:0005524
Mupr16754g00001 1255 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 690 971 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mupr16754g00001 1255 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 355 601 IPR027417 -
Mupr16754g00001 1255 CDD ABC_MTABC3_MDL1_MDL2 1006 1247 - -
Mupr16754g00001 1255 Gene3D ABC transporter type 1, transmembrane domain 26 975 IPR036640 GO:0005524|GO:0016020
Mupr16754g00001 1255 Pfam ABC transporter 1025 1175 IPR003439 GO:0005524
Mupr16754g00001 1255 FunFam ABC transporter B family member 1 25 361 - -
Mupr16754g00001 1255 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 39 328 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mupr16754g00001 1255 Gene3D - 353 602 IPR027417 -
Mupr16754g00001 1255 CDD ABC_MTABC3_MDL1_MDL2 363 601 - -
Mupr16754g00001 1255 ProSitePatterns ABC transporters family signature. 502 516 IPR017871 GO:0005524|GO:0016887
Mupr16754g00001 1255 Gene3D - 996 1254 IPR027417 -
Mupr16754g00001 1255 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 997 1247 IPR027417 -
Mupr16754g00001 1255 CDD ABC_6TM_Pgp_ABCB1_D2_like 673 989 - -
Mupr16754g00001 1255 SUPERFAMILY ABC transporter transmembrane region 34 344 IPR036640 GO:0005524|GO:0016020
Mupr16754g00001 1255 SMART AAA_5 390 576 IPR003593 GO:0016887
Mupr16754g00001 1255 SMART AAA_5 1033 1227 IPR003593 GO:0016887
Mupr16754g00001 1255 FunFam ABC transporter B family member 4 996 1253 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr16754g00001 Mupr-Chr16754 2492 10756 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr16754g00001 22 1248 Calmodulin-binding Proteins AT2G36910 45.286 0.0 1075
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr16754g00001 K05658 - gmx:100807709 2192.16