Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr1672g00001 ATGGAAAATGTAGACACCTCAAAATTTCCACACCAACCTCAAAAACAAGAATCTTCCCTTGGTGACAAGTCCTATGAGAAGAGAGTGATGAAGATTCCAAAAGCAGGAAACAAGAGTGAGAAGAAGTTTCTTGAGGTGAGACAAAGAACTTTAGGAAGATGGATTGCTGAGATTAAGGACTCCTCACAAAAACTAAGGCTTTGGTTAGGAACTTTTGATAAAGCAGAAGATGCTGCCTTGGCTTATGACTGTGCTGCAAGGCTTATCAGAGGGAGAATGCCAAAACAAACTTTCCAAACCATGGAATAA 309 0.4013 MENVDTSKFPHQPQKQESSLGDKSYEKRVMKIPKAGNKSEKKFLEVRQRTLGRWIAEIKDSSQKLRLWLGTFDKAEDAALAYDCAARLIRGRMPKQTFQTME 102
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr1672g00001 102 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 18 92 - -
Mupr1672g00001 102 Gene3D AP2/ERF domain 41 100 IPR036955 GO:0003700|GO:0006355
Mupr1672g00001 102 SMART rav1_2 42 100 IPR001471 GO:0003700|GO:0006355
Mupr1672g00001 102 CDD AP2 41 92 IPR001471 GO:0003700|GO:0006355
Mupr1672g00001 102 MobiDBLite consensus disorder prediction 1 34 - -
Mupr1672g00001 102 MobiDBLite consensus disorder prediction 20 34 - -
Mupr1672g00001 102 Pfam AP2 domain 46 91 IPR001471 GO:0003700|GO:0006355
Mupr1672g00001 102 SUPERFAMILY DNA-binding domain 46 99 IPR016177 GO:0003677
Mupr1672g00001 102 PRINTS Ethylene responsive element binding protein signature 65 81 IPR001471 GO:0003700|GO:0006355
Mupr1672g00001 102 PRINTS Ethylene responsive element binding protein signature 43 54 IPR001471 GO:0003700|GO:0006355
Mupr1672g00001 102 MobiDBLite consensus disorder prediction 1 19 - -
Mupr1672g00001 102 ProSiteProfiles AP2/ERF domain profile. 42 99 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr1672g00001 Mupr-Chr1672 146 467 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr1672g00001 36 98 AP2-EREBP Transcription Factor Family AT5G19790 58.730 8.72e-20 79.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mupr1672g00001 AP2 2.7e-08 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr1672g00001 K09286 - gmx:100800716 138.658