Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr16728g00001 ATGAAAAAGAAGGGTCAAACTTGTTTAGCCATGGAGATAGAAGCTGCAGCCAGCGATAGCAACAAAGCCTTCACTGAGAGGGAGGTGCCACTGCCATATACTGGCTTTGATAGAGGCACCTTCTTGGCTTGGCAAGATCTCAGAGTTGTGCTTCCAAACTTTGGCAAGGGACCAACCAAGAGGTTGCTTAATGGCCTCAATGGCTATGCTGAACCTGGTAGAATCATGGCTATTATGGGCCCTTCTGGCTCTGGAAAATCAACCCTGCTTGATGCACTTGCAGGTAGACTCTCAAAAAATGTGGTTATGACAGGAAATGTTCTTCTCAATGGGAAGAAAAAAGGCCTAGGAGGCAACGGTGTTGTTGCTTATGTAACTCAAGAGGATGTGCTGCTGGGAACACTTACTGTGAAGGAAACGATATCTTACTCAGCGCATCTACGTCTTCCAACAAGTATGAGCAAAGAAGAAGTTGATAGCATAATCGATGGAACAATCATAGAAATGGGTCTCCAAGAATGTGCTGATAGGTTGATTGGTAATTGGCACTTGAGAGGTATAAGCGGTGGAGAAAAGAAAAGGCTAAGCATAGCACTTGAAATCCTCACAAGGCCTTCCCTTTTGTTTCTTGATGAACCCACCACTGGTCTCGATAGTGCCTCTGCTTTTTTCGTTGTTCAAACTCTTAGAAGTGTTGCTCGCGATGGAAGGACCGTTATCTCTTCCATTCACCAGCCCAGTAGTGAAGTCTTTGCACTCTTTGATGACCTTTTCTTACTATCTAGCGGCGAAACTGTTTATTTTGGAGAAGCAAAATCGGCAATTGAGTTCTTTGCTGAAGCTGGTTTCCCTTGTCCACGTAAAAGAAATCCTTCTGATCACTTCCTACGATGTATCAATTCTGATTTCGACGTTGTTACGGCTACACTGAAGGGATCTCAAAGAATTCCTGATGTTAAAAATTCAGCAGATCCTTTCATGAATTTGGCTACAGCAGAGATTAAGGCAATGCTAGCTGAGAAATATAGGCGTTCAACATATGCCAGAAGGGCAAAGGAGAGAATTCAAGAACTATCTAGTGATGAAGGGCTTCAACCTCCGATACAACATGGAAGTCAAGCTAGTTGGTGGAAGCAACTGGCGACGCTGACAAAGAGATCATTTGTGAACATGTGCAGAGATGTGGGTTACTACTGGTTGAGGATCATAATCTACATCATTGTATCCATATGTGTGGGAACAGTTTATTTTGATGTTGGCTACAGCTACACTTCCATCCTGGCCCGAGGTGCCTGTGGTGCATTCATATCAGGATTTATGACATTCATGTCAATTGGGGGTTTTCCATCATTTATTGAAGAAATGAAGGTTTTTTACCGAGAAAGGCTTAATGGATATTATGGAGTTGCGGCATATATTTTAGCCAACTTCCTTTCTTCTTTCCCATTCTTGGTTGCAATTGCTCTAACTACTAGCACCATTACCTATAACATGGTGAAATTCAGGCCAGGGATCATTCACTTTGTGTTTTTCACTCTCAACATCTACAGCTGCATCTCGGTAATAGAGAGCCTCATGATGGTTGTGGCTTCACTTGTTCCAAATTTCCTCATGGGAATAATTACAGGGGCTGGAATAATAGGAATCATGATGATGACCTCCGGATTCTTCAGGTTGCTGTCTGATCTTCCAAAGCCGGTTTGGCGCTATCCAATTTCATATATCAGTTATGGTTCGTGGGCAATACAGAATAACACTTAG 1761 0.4287 MKKKGQTCLAMEIEAAASDSNKAFTEREVPLPYTGFDRGTFLAWQDLRVVLPNFGKGPTKRLLNGLNGYAEPGRIMAIMGPSGSGKSTLLDALAGRLSKNVVMTGNVLLNGKKKGLGGNGVVAYVTQEDVLLGTLTVKETISYSAHLRLPTSMSKEEVDSIIDGTIIEMGLQECADRLIGNWHLRGISGGEKKRLSIALEILTRPSLLFLDEPTTGLDSASAFFVVQTLRSVARDGRTVISSIHQPSSEVFALFDDLFLLSSGETVYFGEAKSAIEFFAEAGFPCPRKRNPSDHFLRCINSDFDVVTATLKGSQRIPDVKNSADPFMNLATAEIKAMLAEKYRRSTYARRAKERIQELSSDEGLQPPIQHGSQASWWKQLATLTKRSFVNMCRDVGYYWLRIIIYIIVSICVGTVYFDVGYSYTSILARGACGAFISGFMTFMSIGGFPSFIEEMKVFYRERLNGYYGVAAYILANFLSSFPFLVAIALTTSTITYNMVKFRPGIIHFVFFTLNIYSCISVIESLMMVVASLVPNFLMGIITGAGIIGIMMMTSGFFRLLSDLPKPVWRYPISYISYGSWAIQNNT 586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr16728g00001 586 Pfam ABC-2 type transporter 244 317 IPR043926 GO:0140359
Mupr16728g00001 586 CDD ABCG_EPDR 42 269 - -
Mupr16728g00001 586 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 58 279 IPR027417 -
Mupr16728g00001 586 Pfam ABC transporter 63 214 IPR003439 GO:0005524
Mupr16728g00001 586 FunFam ABC transporter G family member 11 36 281 - -
Mupr16728g00001 586 Pfam ABC-2 type transporter 379 583 IPR013525 GO:0016020|GO:0140359
Mupr16728g00001 586 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 42 287 IPR003439 GO:0005524
Mupr16728g00001 586 ProSitePatterns ABC transporters family signature. 187 201 IPR017871 GO:0005524|GO:0016887
Mupr16728g00001 586 Gene3D - 43 281 IPR027417 -
Mupr16728g00001 586 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 35 584 - -
Mupr16728g00001 586 SMART AAA_5 72 244 IPR003593 GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr16728g00001 Mupr-Chr16728 591 5882 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr16728g00001 58 256 Calmodulin-binding Proteins AT2G36910 30.622 1.32e-11 65.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr16728g00001 K05681 - gmx:100777598 1006.51