Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr16719g00002 ATGGATCAACAGCACACAACAGTAGTGACAGCAACACGAAAACATGGATCACCAATCTCTGAGATGATGCCCCCTGAGCAAGAAACCACTATTGCACCAAATATTCCAGCCATCACAACCCGAAGCGAGACCAGCTCGGTCCACCACGAACCAGAGGGTTCTTCCACCAACAAAATCAAACCAAGTTTGGATGATAATGGCATTCCCCCGCAGCATCAGACTCAGCCAACAACACCGCCACCACCAAGATTTTCCGTTCTTCACCAATCCTTGCGTCCCATTACCCTCAAATTTGAAGACGTATCTTACACGATAACCTTCGAGAGCCAAAAGAACAGCGGTTGTGTTTTACGTAAAGAGGCAAAGCTAAGAAGAAAAGTGCTGAGCGGGGTAACCGGAGTAGCGAACCCCGGCGAGCTAACGGCAATGCTGGGGCCCTCCGGGAGCGGCAAGACGACCCTGTTAACCGCCCTGGCGGGGAGGCTGGCCGGAAAAGTGTCCGGCAGCATAACCTACAACGGGCACAGCGACTCCACCTTGGTGAAGAGAAAGATCGGGTTCGTGCCGCAAGACGACGTTCTGTACCCTCACCTGACAGTGTTGGAGACCCTCACCTACGCGGCGTTGTTGAGGCTTCCGAAGAGTTTGAGCAGAGAAGAGAAAGTGGAGCACGCGGAGATGGTGATCGCGGAGCTAGGACTAACACGGTGTCGTAATAGCCCCGTGGGAGGGTGCATGGGTCTTTTCCGAGGCATTTCGGGTGGGGAGCGGAAACGGGTCAGTATCGGGCAGGAGATGTTGATCAACCCGAGTTTGTTGTTTGTGGATGAGCCCACCTCGGGCCTGGACTCCACCACGGCCCAACTCATCGTGTCCGCTCTCCGCAGCCTCGCCCAGGCTGGCCGGACCGTCGTCACCACCATTCACCAGCCTTCCAGCCGCTTGTATAGGATGTTTGATAAGGTGGTCGTCTTGTCCGATGGTTACCCGATTTATAGCGGCCGGGCGGGTCGGGTCATGGACTATCTCGGATCCGTTGGTTATGTCCCCGCTTTCAATTTCATGAACCCGGCAGATTTCCTACTTGACCTTGCTAATGGCATAGTTGCTGATGTCAAACATGATGAACAAATAGACCACCATGAGGATCAAGCTTCAGTCAAACAGTCCCTAATTTCATCCTTTAAGAAGAACTTATATCCTGCTCTTCAAGAAGACATTCAGCAAAATAACAGTGACCCGCTGTCTTTTACATCTAGACGTTCTGATAACCAATGGACCACTAGCTGGTGGCAGCAATTCAAGGTTCTTCTTAAGAGGGGTTTACAAGAGAGGAGGCATGAATCATTTTCTGGCTTAAGGATTTTCCAAGTTTTGTCTGTATCCATTCTCTCAGGACTTCTGTGGTGGCACTCTGATCCTGCACATGTACAAGATCAGGTGGGACTCCTTTTCTTCTTCTCCATCTTCTGGGGATTCTTCCCTCTCTTCAATGCCATCTTTGCATTTCCTCTGGAGAGGCCAATGCTGATAAAAGAAAGATCATCAGGGATGTACCAACTCTCCTCATACTATGTTGCAAGGATGGTGGGGGACTTACCAATGGAGCTAGTGCTTCCTACTATCTTTGTAACTATCTCATACTGGATGGGTGGTCTCAAGCCTTCATTGGTCACATTTATGTTAACCCTCTTGATCATGCTTTTCAATGTGCTAGTCTCTCAAGGCATAGGCCTAGCACTTGGGGCCATTCTCATGGATGTGAAACAGGCCACAACTCTAGCTTCAGTGACCATGCTGGTGTTTCTCTTGGCTGGTGGTTACTACATTCAGCAAATGCCTGCTTTTATAGCTTGGTTAAAGTACATTTCTTTCAGCCACTACTGCTATAAGCTACTGGTAGGAGTCCAGTATTCAGTAAATGAGGTATACGAGTGTGGACCAGGGTTGCACTGTAGGGTAAGAGATTTTCCTGCCATAAAGTGTCTGGGGCTTGATGATAGTATGTGGGAAGATGTGGCTGCATTGACTGTAATGTTGATTGGCTACAGAGTTGTGGCATATCTAGCTTTGAGGATGGGGCAGCGTCACTGA 2094 0.4967 MDQQHTTVVTATRKHGSPISEMMPPEQETTIAPNIPAITTRSETSSVHHEPEGSSTNKIKPSLDDNGIPPQHQTQPTTPPPPRFSVLHQSLRPITLKFEDVSYTITFESQKNSGCVLRKEAKLRRKVLSGVTGVANPGELTAMLGPSGSGKTTLLTALAGRLAGKVSGSITYNGHSDSTLVKRKIGFVPQDDVLYPHLTVLETLTYAALLRLPKSLSREEKVEHAEMVIAELGLTRCRNSPVGGCMGLFRGISGGERKRVSIGQEMLINPSLLFVDEPTSGLDSTTAQLIVSALRSLAQAGRTVVTTIHQPSSRLYRMFDKVVVLSDGYPIYSGRAGRVMDYLGSVGYVPAFNFMNPADFLLDLANGIVADVKHDEQIDHHEDQASVKQSLISSFKKNLYPALQEDIQQNNSDPLSFTSRRSDNQWTTSWWQQFKVLLKRGLQERRHESFSGLRIFQVLSVSILSGLLWWHSDPAHVQDQVGLLFFFSIFWGFFPLFNAIFAFPLERPMLIKERSSGMYQLSSYYVARMVGDLPMELVLPTIFVTISYWMGGLKPSLVTFMLTLLIMLFNVLVSQGIGLALGAILMDVKQATTLASVTMLVFLLAGGYYIQQMPAFIAWLKYISFSHYCYKLLVGVQYSVNEVYECGPGLHCRVRDFPAIKCLGLDDSMWEDVAALTVMLIGYRVVAYLALRMGQRH 697
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr16719g00002 697 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 96 352 IPR003439 GO:0005524
Mupr16719g00002 697 MobiDBLite consensus disorder prediction 32 72 - -
Mupr16719g00002 697 ProSitePatterns ABC transporters family signature. 252 266 IPR017871 GO:0005524|GO:0016887
Mupr16719g00002 697 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 125 345 IPR027417 -
Mupr16719g00002 697 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 62 688 - -
Mupr16719g00002 697 Pfam ABC-2 type transporter 432 638 IPR013525 GO:0016020|GO:0140359
Mupr16719g00002 697 Gene3D - 115 346 IPR027417 -
Mupr16719g00002 697 Pfam ABC-2 type transporter 309 373 IPR043926 GO:0140359
Mupr16719g00002 697 MobiDBLite consensus disorder prediction 1 85 - -
Mupr16719g00002 697 CDD ABCG_EPDR 93 334 - -
Mupr16719g00002 697 SMART AAA_5 137 330 IPR003593 GO:0016887
Mupr16719g00002 697 FunFam ABC transporter G family member 22 115 346 - -
Mupr16719g00002 697 Pfam ABC transporter 130 280 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr16719g00002 Mupr-Chr16719 2886 7404 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr16719g00002 126 328 Calmodulin-binding Proteins AT2G36910 31.019 2.13e-13 72.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr16719g00002 K05681 - gmx:100783696 1204.5