Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr16708g00001 ATGACCTTCATCAGGGAGGATGAAGTTGATCATGATCATCATGTGTCAATCAATGTCAACCATGTGGATGGTGGATCACATACCAATGACAACTATGAAGTTGTGACCCCTGAAGGGGATAATAACTTAGGAGAATGGTTGAGTTTAGGCCTGAAAGGAGACACGCATCTGGAAGGAGCGGAACAAAACACAGATTCCCAATCATCAAAACCACCCCACAACAAGATCTTCTCATGCAACTTCTGCATGAGAAAGTTTTACAGTTCACAGGCTTTAGGGGGTCACCAGAATGCACACAAGAGGGAAAGAGAAGCTGCTAGAAGTTACCAATCTCACAGGATGATGACAACATCAACAATGGGGCTTGCTTACTCTTCACTGGCGTCTCGGTCGCTGGGAATACAGCCTCACTCTCTTGTGCACAAGCCAGGCAGAGAAAGGTCTGCTATGGTTGCTAGATTCAGTGATGCCAATAATGGGATTCGAGTGCCATCATGGACACCCTTCATGCTTGAACAAGCTGTGGATTTCATATGGCCAGGTAGCTTTCGGGTCGACTTTCCAAAGCAAGAATCGGATAATGGAAACAACCATGTCTATGTGTATTACAATTACAACTTCACGGAATATTAA 633 0.4471 MTFIREDEVDHDHHVSINVNHVDGGSHTNDNYEVVTPEGDNNLGEWLSLGLKGDTHLEGAEQNTDSQSSKPPHNKIFSCNFCMRKFYSSQALGGHQNAHKREREAARSYQSHRMMTTSTMGLAYSSLASRSLGIQPHSLVHKPGRERSAMVARFSDANNGIRVPSWTPFMLEQAVDFIWPGSFRVDFPKQESDNGNNHVYVYYNYNFTEY 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr16708g00001 210 ProSiteProfiles Zinc finger C2H2 type domain profile. 77 104 IPR013087 -
Mupr16708g00001 210 Gene3D Classic Zinc Finger 57 128 - -
Mupr16708g00001 210 PANTHER ZINC FINGER PROTEIN 4-LIKE 20 193 - -
Mupr16708g00001 210 SUPERFAMILY beta-beta-alpha zinc fingers 74 104 IPR036236 -
Mupr16708g00001 210 ProSitePatterns Zinc finger C2H2 type domain signature. 79 99 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr16708g00001 Mupr-Chr16708 6787 7601 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr16708g00001 25 184 C2H2 Transcription Factor Family AT1G24625 41.212 3.29e-22 88.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr16708g00001 - - ccaj:109809498 288.5