Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr16679g00001 ATGCGAACGCTTTGTGATGCCTGTGAGAGCGCCGCAGCTATCGTTTTCTGCGCGGCTGATGAGGCCGCGCTATGCCGTGACTGTGATGAGAAGGTTCACATGTGTAATAAGCTAGCTAGCCGGCATGTAAGGGTAGGTCTAGCAAGTCCAAGTGATGTGGCACGCTGCGACATTTGCGAGAATGCACCTGCTTTCTTCTATTGTGAGACAGATGGAAGTTCCCTTTGTTTGCAGTGTGATATGATAGTTCATGTTGGGGGCAAAAGAACACATGGAAGATATCTTCTTTTTAGGCAGAGAGTTGAGTTTCCAGGAGATAAACCTGGTAATGCAGAAAACCCAGCTTCACAATCTCTGGATCCAGGTGAGACTAAAAGAGGACAAAATCCACTGCCAAAAATAAGAAGTGGAGAAAAACAGCAAAATCACAGGATGCCTCTGGTTCTGACGCCAGAACCTGATGCTGAATGGAATGCCATGATGGAAACCAAAATGATTGATTTGAACGTGAAGCCTCAGAGAATACATGAACAAACATCAAATAATCAGGTTAGGCTGCTTGAAAAGTAA 570 0.4509 MRTLCDACESAAAIVFCAADEAALCRDCDEKVHMCNKLASRHVRVGLASPSDVARCDICENAPAFFYCETDGSSLCLQCDMIVHVGGKRTHGRYLLFRQRVEFPGDKPGNAENPASQSLDPGETKRGQNPLPKIRSGEKQQNHRMPLVLTPEPDAEWNAMMETKMIDLNVKPQRIHEQTSNNQVRLLEK 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr16679g00001 189 Pfam B-box zinc finger 3 42 IPR000315 GO:0008270
Mupr16679g00001 189 Pfam B-box zinc finger 53 90 IPR000315 GO:0008270
Mupr16679g00001 189 SMART bboxneu5 1 47 IPR000315 GO:0008270
Mupr16679g00001 189 SMART bboxneu5 51 96 IPR000315 GO:0008270
Mupr16679g00001 189 SUPERFAMILY B-box zinc-binding domain 48 86 - -
Mupr16679g00001 189 FunFam B-box zinc finger protein 19 2 92 - -
Mupr16679g00001 189 CDD Bbox1_BBX-like 56 96 - -
Mupr16679g00001 189 ProSiteProfiles Zinc finger B-box type profile. 1 47 IPR000315 GO:0008270
Mupr16679g00001 189 Gene3D Classic Zinc Finger 2 91 - -
Mupr16679g00001 189 CDD Bbox1_BBX-like 4 47 - -
Mupr16679g00001 189 ProSiteProfiles Zinc finger B-box type profile. 51 96 IPR000315 GO:0008270
Mupr16679g00001 189 PANTHER B-BOX ZINC FINGER PROTEIN 22 1 135 - -
Mupr16679g00001 189 MobiDBLite consensus disorder prediction 105 148 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr16679g00001 Mupr-Chr16679 2850 4393 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr16679g00001 1 183 C2C2-CO-like Transcription Factor Family AT4G38960 62.842 7.94e-77 226
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF DBB Mupr16679g00001 zf-B_box 4.8e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr16679g00001 - - vun:114176173 350.132