Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr16635g00001 ATGGAAGTTGTGGCAGCGAAAGCGCTGAAAACTAGCCTGCGGAAAGAGTACACTATCCCTCAAGCAATCTGCGACGAGATTTTGTGTTTTAACGCGAACAACATTGTTGTCGGTGAAGATTTCTCCGTTGACGACCTTCTTGACTTTTCCAACGGCGAAGAAATCGATGACTACGAGGAAGAGGAAGACGAAGAAAAAGACAGCACCTCCGGTTCCTCCAACTCGCAGGACCGAACAGAAGACGACAGCAACTCCAATTCCACCGCCGGAGGCAGCGGCGACTCCGATTCTGTTTTCGCCGGCGAATTGTCAGTTCCGGCGGATGATGTGGCGGACCTGGAGTGGGTTTCTCACTTCGTGGACGATTCTCTGCCAGAGCTATCACTATTGTACCCCGTCCGTTCCGAGCAAACAAGGGTATGGGCCGAACCGGAACCTAGACCGGGCCAGGCCCAAACCCCCTCGACAGTCCCCAGAAAGCCGAGAACTGAAAAGGCTAGAAAGCCCAACGTTCGTGTCTGGTCCTATACGCTCTCCGCACCATCTTTGTGTTCTTCGGTGTTGGCTGGCTCAGTCACGAGCGTTGAGTTTGGCGAGCCCGCGGCTAAGAAGCAGAAGAAAAAAGGTGAGGCCCAAAGCGGTGGGGCCCAGTTTCAGCGACGGTGCAGCCACTGCCAGGTGCAGAAAACGCCGCAGTGGAGGACTGGCCCACTGGGCCCGAAAACACTCTGCAACGCTTGCGGGGTTCGGTATAAGTCGGGTCGGCTTTTTCCAGAGTATAGACCGGCCTGCAGCCCAACTTTCTCTGGCGATGTTCACTCCAACAGCCATCGTAAAGTGTTGGAGATGAGGCGGAGAAAAGAGATGGGTGAACCGGTAACCGGTTTGGACCGAACTCAAATGGTCCCGAGTTGCTGA 918 0.549 MEVVAAKALKTSLRKEYTIPQAICDEILCFNANNIVVGEDFSVDDLLDFSNGEEIDDYEEEEDEEKDSTSGSSNSQDRTEDDSNSNSTAGGSGDSDSVFAGELSVPADDVADLEWVSHFVDDSLPELSLLYPVRSEQTRVWAEPEPRPGQAQTPSTVPRKPRTEKARKPNVRVWSYTLSAPSLCSSVLAGSVTSVEFGEPAAKKQKKKGEAQSGGAQFQRRCSHCQVQKTPQWRTGPLGPKTLCNACGVRYKSGRLFPEYRPACSPTFSGDVHSNSHRKVLEMRRRKEMGEPVTGLDRTQMVPSC 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr16635g00001 305 CDD ZnF_GATA 221 270 IPR000679 GO:0006355|GO:0043565
Mupr16635g00001 305 SMART GATA_3 216 270 IPR000679 GO:0006355|GO:0043565
Mupr16635g00001 305 MobiDBLite consensus disorder prediction 52 67 - -
Mupr16635g00001 305 Pfam GATA zinc finger 222 255 IPR000679 GO:0006355|GO:0043565
Mupr16635g00001 305 PIRSF Txn_fac_GATA_plant 1 303 IPR016679 GO:0003677|GO:0005634|GO:0045893
Mupr16635g00001 305 MobiDBLite consensus disorder prediction 138 168 - -
Mupr16635g00001 305 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 219 279 - -
Mupr16635g00001 305 ProSiteProfiles GATA-type zinc finger domain profile. 220 252 IPR000679 GO:0006355|GO:0043565
Mupr16635g00001 305 FunFam GATA transcription factor 212 298 - -
Mupr16635g00001 305 ProSitePatterns GATA-type zinc finger domain. 222 247 IPR000679 GO:0006355|GO:0043565
Mupr16635g00001 305 MobiDBLite consensus disorder prediction 72 94 - -
Mupr16635g00001 305 PANTHER GATA TRANSCRIPTION FACTOR 32 289 - -
Mupr16635g00001 305 MobiDBLite consensus disorder prediction 52 100 - -
Mupr16635g00001 305 Gene3D - 214 291 IPR013088 GO:0006355|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr16635g00001 Mupr-Chr16635 1928 3098 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr16635g00001 40 287 C2C2-Gata Transcription Factor Family AT4G36240 44.231 1.65e-55 178
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Mupr16635g00001 GATA 3.6e-16 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr16635g00001 - - gmx:100776188 427.172