Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr16628g00001 ATGGACAAGGCCCATGTACTAAGAGAGGCTATCAATTACGTGAAACAACTGCAAGAACGTGTAGAAGAGCTAGAAGAAGATATCCAGAAAAACGGTGCAGAATCAACGATTACCATAACAAGATCTCATCTCTGCATTGATGAATGCCATGGTAATGGATCCAATGAAGCACTTCCTGAAGTTGAAGCGAGAGTGTTGGGGAAGGAAGTGTTGATCAAAATTCACTGTGCCAAACAAAAGGGAATTCTGCTTAAATTAATGTCTCAGCTTGAACGTCTTCATCTCTACATATCCACTAGCAATGTCTTGCCATTTGGGAATACCCTTGACATCACCATTATTGCTCAGATGGATGACAAATACAACTTGGTTGTGAAGGATTTAGTGAAAGAACTAAGACAAGTGGCCATGTGA 414 0.4058 MDKAHVLREAINYVKQLQERVEELEEDIQKNGAESTITITRSHLCIDECHGNGSNEALPEVEARVLGKEVLIKIHCAKQKGILLKLMSQLERLHLYISTSNVLPFGNTLDITIIAQMDDKYNLVVKDLVKELRQVAM 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr16628g00001 137 Coils Coil 7 34 - -
Mupr16628g00001 137 Gene3D - 1 37 IPR036638 GO:0046983
Mupr16628g00001 137 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 1 36 IPR036638 GO:0046983
Mupr16628g00001 137 PANTHER BHLH TRANSCRIPTION FACTOR 1 136 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr16628g00001 Mupr-Chr16628 609 1304 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr16628g00001 1 133 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 45.390 3.02e-33 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr16628g00001 - - gmx:100795184 229.95