Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr16622g00001 ATGACTACAGAAGCTCAAAGGGTAGTAGTGATCCAAGATGCATCAAGAAATGTTAGTTCAAAGGCAATCCTAAGGGTCCTGACAAAGTTTTCTGCTAAGGCTGGAGATCAGCTTATAATTGTTGCTATCCGTGATTGGATTAGCAGTCCCATTGTAATTGATATTGCTAACTTTTCTTTTCTCTTCTTCCTCTTTTTCTCTTTAGTGGGTTACATGGTCAGAGTTGATTCCGGTTCAATTGTTTCAACAAACCAGAAAGTAATTAAGAAGTACATCATAAAAAAGGAAGAATATCTTAAGAACCAGAAGGTCAAGGAGATCTCCAACTACTGTAAATCGAAAGAGATTGGATTCCAAATAGAAGTGATTGTAGGCCCGGCTGCAGAGGTTGCTTCTAATGCTGCCAAGGATTTTCAGGCAACAAGTTTGATACTTGTTAGGTCCCTTTTACAGATTCACAAAGATATGAAGAATGTCATGGACAGCCTCTCTTGTGGCATGTATAGGATAACAAGTGACAATTCAATTGAGAAGTTGAAAGATCCAAAATCAACAGCCACCACCAAATCACTAGCTGACAGGCAAGAAAATGTAACCTATAATGAAATGTTTCCAGGAGGTGAAGAGGAAGAACGTTCTCGTCTGATGTCCAGGTCTTCATCAAGTGATCTTTTCACATCAAGTCAGTGGAGTACTGCCGAAGCCTCCACTTCTAGTTTTGGAAGCTCGCAGCATGGCCATCAAAAATACCAAGAGGGAAAGTTTTATTCAAATATGGAAGAAACAGAAGGGAAGCAATCACTATTTCACATTTCGGTGAATGAAGAAACGAGCCAAATGGAAGTAAATAAAAAAGAGCAACACAGTAGCAATAAGGAAACATGTCATATGGAGGAAGAATTTGCAAATCCACTTTGTTCTGTGTGCAATAATAGACGACCAAAAATTGGATGGAAGAGAGATTTCAGTTATGCGGAGCTCTACGTCGCTACACAAGGATTTAATCCAAAGAACTTTCTGTCAGAAGGTGGATTTGGATCTGTCTACAAAGGACTGCTGAATGAAATGAAGATTGCTGTTAAGCAACATAAAAATGCAAGCTGCCAAGGAGAAAAGGAATTTAAGTCTGAAGTGGATGTACTTAGCAAAGCAAGACATGAGAATGTAGTGGTGCTGCTAGGTTCATGTTCAGAAGGACCTTATAGGCTTCTTGTCTATGAATATGTTTGCAATGGCTCACTTGACCAACATCTATCTCAACACTCTCGATCACCTCTTAGTTGGGAAGATAGGATCAACGTAGCTATTGGAGCTGCCAAAGGTTTACTATACTTACACAATAACAACATAATACACAGAGATGTGAGACCAAACAATATCCTTATTACACATGATCATCAACCATTGCTGGGAGACTTTGGGTTAGCAAGAAATCAAAATCAAGATTCGATACACTCAACGGAAGTTGTTGGAACTTTGGGGTATTTGGCACCAGAATATGCAGAACATGGAAAAGTGTCTACCAAAACAGATGTATATTCTTTTGGGGTGGTTCTACTACAGCTAATAACAGGAATGAGAACTACAGATAAAAGACTTGGAGGAAGAAGTCTTGTGGGATGGGCAAGGCCGCTTTTAAAAGAGAGGAACTACCCAGATTTAATTGATGAAAGGATCATCAACTCTCATGATGTCCATCAACTATTTTGGATGGTTCGAATAGCAGAGAAATGTCTAAGCAGGGAACCTCAAAGGAGACTAACTATGATTCAGATTGTTGAGGCTTTGACTGACATAGTGGAAGGCAGAACATGTGACATCATATTAAGGGATTACTCCCCTGCAAGGTCAGATTCAATGTACAGTGCATCAGACTCTGATGAATCTGAAGATGAAATGCAGGGATCCTTCAAGTTGGAAGACCAGCTACAAAATCACCCTTCAGAATCGACAGAAAGTAATAGCACAAGTCATATAATGCAGCTGATTGTAAGACAGCCACCATCCCCTCCAATTCAGAGCATCTCTTCAAGTAGCTCATACTCATTTGAGGTTCATGGTGAGTCAACCAGTGATGGTGAAGCACAGAATGAAGGGGAAATAGAAATATCAAAATCCAATGGGGGGAGAGAGGTGGAGTAA 2142 0.3992 MTTEAQRVVVIQDASRNVSSKAILRVLTKFSAKAGDQLIIVAIRDWISSPIVIDIANFSFLFFLFFSLVGYMVRVDSGSIVSTNQKVIKKYIIKKEEYLKNQKVKEISNYCKSKEIGFQIEVIVGPAAEVASNAAKDFQATSLILVRSLLQIHKDMKNVMDSLSCGMYRITSDNSIEKLKDPKSTATTKSLADRQENVTYNEMFPGGEEEERSRLMSRSSSSDLFTSSQWSTAEASTSSFGSSQHGHQKYQEGKFYSNMEETEGKQSLFHISVNEETSQMEVNKKEQHSSNKETCHMEEEFANPLCSVCNNRRPKIGWKRDFSYAELYVATQGFNPKNFLSEGGFGSVYKGLLNEMKIAVKQHKNASCQGEKEFKSEVDVLSKARHENVVVLLGSCSEGPYRLLVYEYVCNGSLDQHLSQHSRSPLSWEDRINVAIGAAKGLLYLHNNNIIHRDVRPNNILITHDHQPLLGDFGLARNQNQDSIHSTEVVGTLGYLAPEYAEHGKVSTKTDVYSFGVVLLQLITGMRTTDKRLGGRSLVGWARPLLKERNYPDLIDERIINSHDVHQLFWMVRIAEKCLSREPQRRLTMIQIVEALTDIVEGRTCDIILRDYSPARSDSMYSASDSDESEDEMQGSFKLEDQLQNHPSESTESNSTSHIMQLIVRQPPSPPIQSISSSSSYSFEVHGESTSDGEAQNEGEIEISKSNGGREVE 713
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr16622g00001 713 SUPERFAMILY Protein kinase-like (PK-like) 319 623 IPR011009 -
Mupr16622g00001 713 MobiDBLite consensus disorder prediction 642 703 - -
Mupr16622g00001 713 MobiDBLite consensus disorder prediction 642 713 - -
Mupr16622g00001 713 ProSiteProfiles Protein kinase domain profile. 334 600 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr16622g00001 713 MobiDBLite consensus disorder prediction 179 220 - -
Mupr16622g00001 713 Pfam Protein tyrosine and serine/threonine kinase 338 596 IPR001245 GO:0004672|GO:0006468
Mupr16622g00001 713 SMART tyrkin_6 334 596 IPR020635 GO:0004713|GO:0006468
Mupr16622g00001 713 Gene3D Phosphorylase Kinase; domain 1 306 408 - -
Mupr16622g00001 713 ProSitePatterns Tyrosine protein kinases specific active-site signature. 450 462 IPR008266 GO:0004672|GO:0006468
Mupr16622g00001 713 Gene3D Transferase(Phosphotransferase) domain 1 409 609 - -
Mupr16622g00001 713 FunFam Proline-rich receptor-like protein kinase PERK8 296 408 - -
Mupr16622g00001 713 FunFam receptor-like cytosolic serine/threonine-protein kinase RBK1 isoform X1 409 611 - -
Mupr16622g00001 713 PANTHER OS01G0253100 PROTEIN 227 600 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr16622g00001 Mupr-Chr16622 859 8139 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr16622g00001 322 607 Trihelix Transcription Factor Family AT1G70460 45.791 1.55e-75 256
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Mupr16622g00001 PK_Tyr_Ser-Thr 9.1e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr16622g00001 - - gsj:114417376 1008.44