Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr16621g00001 ATGGTTTCAATGCTCACCTCGAGGCAATCCTTGTACATCTCTTCCTCCTCTTCTCCTTCTCCTTCTTCTTCATTGTTTTGTATCATTCTCCTCCAAGTTACACTTCTCTATGGCCTTGCCTTCTCTGCCAACCATGAAGCCTCAACTCTCTTCTCTTGGCTCCATACTCCTTCTGCAACACCACCTCCTCCATTTTTCTCTAACTGGAACATCCTTGATCCCAATCCATGCAACTGGACATCTATAACATGTTCCTCACTAGGCTTTGTCACTGAAATCAACATACAATCCATCCCTCTAGAGCTTCCTATGCCCTCCAACCTCTCTTCATTTCACTCTCTCAAAAAGCTTGTCATTTCTGATGCCAATCTCACTGGAACCATCCCTTCAGGCATTGGTGACTGCTCTTCCCTCACTGTCATTGACCTCAGCTCCAACAACCTTGTTGGCTCTATTCCTCCAAGCATTGGCAAGCTCCAGAACCTTCAGAACTTGTCCTTGAACTCTAACCAGCTTACTGGAAAAATTCCAGTTGAGTTAAGCAACTGCATTGGCTTAAAAAATCTACTCCTTTTTGATAATCAGCTAGGTGGGACTATCCCACCTGAGCTGGGAAAGTTGTCACAACTTGAGTCTCTAAGAGCAGGAGGGAACAAAGATATTGTTGGGAAGATTCCTGAGGAGATTGGAGAATGCAGCAATTTGACTGTGTTGGGGCTGGCTGATACCAGAATATCTGGTTCTTTGCCTGCTTCTTTGGGAAGGCTTACAAAGCTTCAGACATTGTCCATCTATACTACCATGCTGTCTGGTGAGATTCCACCAGAGTTAGGTAACTGTTCTGAACTGATTGACTTGTTCCTGTATGAAAATAGCCTATCAGGGTCTATTCCATCTGAGCTTGGTAAGCTCCAGAAGCTGCAACAGTTGTTTCTGTGGCAGAATGGTCTTGTAGGGGCTATCCCACAAGAGATTGGTAACTGTACAAGCTTGAGAAAAATTGATTTCTCTTTGAATTCTCTATCCGGGACTATACCTTTGTCTCTGGGGGGTCTTTTGGCGCTTGAAGAGTTTATGATTAGTGACAACAATGTGTCTGGTTCAATCCCTTATAGTCTTTCAAATGCTAAAAATCTTCAACAGTTGCAAGTTGACACAAACCAGCTCTCAGGTTTGATTCCAGCAGAGCTTGGGAAGTTGTCAAACCTTATGGTGTTCTTTGCTTGGCAGAACCAGCTTGAAGGAAGCATTCCCTCCACTTTGGGGAACTGCAGTAACCTTCAAGCACTTGACTTGTCGCGCAATTCACTAACTGGTAGTATTCCTGTTGGCCTATTCCAGCTCCAAAACCTCACAAAACTGCTGCTGATTTCCAATGACATATCAGGTTTTATACCAAATGAAATAGGCAGTTGCAGCTCTCTTATAAGGTTGAGGCTTGGAAACAATAGGATCACTGGTAGCATTCCCAAGACAATAGGCAGCCTCAAGAGCTTGAACTTCTTAGATCTCTCTGGGAATCGCCTCTCCGGGCTAGTCCCTGATGACATTGGAAGCTGCACTCAACTCCAAATGATAGACTTCAGCAGTAACAACTTAGAAGGTCCTCTGCCTAATTCTCTCTCTTCACTATCTGCAGTTCAGGTATTGGATGCATCTTCCAACAAGTTTTCAGGTCCTATACCGGCTAGTTTGGGCCGGCTTGTTTCTCTGAGCAAGCTAATCCTAAGCAATAACTTATTTTCTGGACCTATTCCTGCATCACTGAGCCTGTGTTCAAATCTCCAACTTCTTGATCTTAGTAGCAACAAGCTCAGTGGAAGCATACCGGCCGAGCTGGGCCGCATGGAGACACTAGAAATTGCTCTCAATCTTAGTTGCAACTCACTCAGTGGAACAATCCCAGCTCAGATATCTGCTCTTAACAAGCTTTCCATACTGGACCTCTCACACAACCAGCTGGAAGGAGATTTGCAGCCTCTTGCAGAGTTAGACAACCTTGTCTCCCTCAATGTTTCTTACAACAAATTTTCTGGCTGTCTTCCAGATAACAAGCTTTTCAGGCAGTTGTCATCAAAAGACCTCACTGCAAATGAAGGGCTATCATGCTTTCTGAAGGATTCTGGGAAGGCTGGTGTGGCATATAATGAAAATGAAGTAAGGAAGTCGCGAAGGCTGAAGCTAGCCATTGGATTGCTGATAGCCTTAACAGTGATAATGATTGTTATGGGGATAACTGCTGTGATCAAAGCAAGGAAACCCATTAGAGATGATGATTCAGAACTGGGAGACTCGTGGCCTTGGCAATTCATACCATTCCAGAAGCTAAACTTTTCAGTGGAACAAGTGCTGAGATGTTTAGTTGATAGAAACATAATTGGGAAGGGTTGTTCTGGTGTTGTTTATAGAGCTGAAATGGATAATGGTGAAGCCATTGCTGTGAAGAAATTGTGGCCTACAACAATTGATGCAGGAGAGGCATTTAAGGAAGAAAAAAGTGGAGTTCGTGACTCGTTCTCAGCCGAGGTCAAGACCCTTGGCTCAATCCGTCATAAGAACATTGTCAGATTCTTGGGGTGCTGTTGGAACAGAAAAACAAGATTGCTTATTTTCGATTACATGCCCAATGGAAGTTTGAGTAATATACTTCATGAGAGGAGTGGAAACTCTCTGGAATGGGAACTTAGGTACAGAATCTTGTTAGGTGCTGCAGAAGGCCTTGCATATTTACACCATGACTGTGTCCCTCCTATAGTTCACAGAGATATTAAAGCCAACAACATCCTCATAGGCCTTGAATTTGAGCCTTACATTGCTGACTTTGGCTTGGCTAAACTTGTTGATGATGGTGATTTTGGTCGTTCTTCCAATACAGTTGCTGGTTCATATGGATATATTGCTCCAGGTGAGTTTGAATTTGTTTCAGAATATGGCTATATGATGAAGATCACAGAGAAGAGTGATGTTTATAGCTATGGTAAGCAACCAATTGATCCAACCATACCAGATGGTCTACATGTTGTTGATTGGGTGAGACAGAAAAAGGGTCTTGAAGTGCTTGATCCTAGCTTACTCTCTAGACCAGAATCAGAAATAGAGGAAATGATGCAAGCATTGGGAATAGCCTTGTTGTGTGTGAACTCATCCCCTGATGAAAGGCCAACAATGAGAGATATCGCCGCAATGCTCAAGGAGATAAAGCATGAAAGAGAGGAGTATGCAAAATTTGATGTGCTTCTAAAAGGGTCTCCTGCAAATGGTGCTGCATCATGTGGGAATAAAAGCTTTGGTGGAGTTGTGCCAACATCTTCTTCATCAGTACCAGGCATGCAAAATTTGAAAACAAAAAGCAATAACTCAAGCTTCTCTGTGTCTTCACTGCTTCATTCATCCTCAAGTGTCAAGCTGGTTAGAACATTCAGCTCGCATTTGCTGTTTGGGCTTTTAAGAGTACGGCATGGTTGA 3465 0.4335 MVSMLTSRQSLYISSSSSPSPSSSLFCIILLQVTLLYGLAFSANHEASTLFSWLHTPSATPPPPFFSNWNILDPNPCNWTSITCSSLGFVTEINIQSIPLELPMPSNLSSFHSLKKLVISDANLTGTIPSGIGDCSSLTVIDLSSNNLVGSIPPSIGKLQNLQNLSLNSNQLTGKIPVELSNCIGLKNLLLFDNQLGGTIPPELGKLSQLESLRAGGNKDIVGKIPEEIGECSNLTVLGLADTRISGSLPASLGRLTKLQTLSIYTTMLSGEIPPELGNCSELIDLFLYENSLSGSIPSELGKLQKLQQLFLWQNGLVGAIPQEIGNCTSLRKIDFSLNSLSGTIPLSLGGLLALEEFMISDNNVSGSIPYSLSNAKNLQQLQVDTNQLSGLIPAELGKLSNLMVFFAWQNQLEGSIPSTLGNCSNLQALDLSRNSLTGSIPVGLFQLQNLTKLLLISNDISGFIPNEIGSCSSLIRLRLGNNRITGSIPKTIGSLKSLNFLDLSGNRLSGLVPDDIGSCTQLQMIDFSSNNLEGPLPNSLSSLSAVQVLDASSNKFSGPIPASLGRLVSLSKLILSNNLFSGPIPASLSLCSNLQLLDLSSNKLSGSIPAELGRMETLEIALNLSCNSLSGTIPAQISALNKLSILDLSHNQLEGDLQPLAELDNLVSLNVSYNKFSGCLPDNKLFRQLSSKDLTANEGLSCFLKDSGKAGVAYNENEVRKSRRLKLAIGLLIALTVIMIVMGITAVIKARKPIRDDDSELGDSWPWQFIPFQKLNFSVEQVLRCLVDRNIIGKGCSGVVYRAEMDNGEAIAVKKLWPTTIDAGEAFKEEKSGVRDSFSAEVKTLGSIRHKNIVRFLGCCWNRKTRLLIFDYMPNGSLSNILHERSGNSLEWELRYRILLGAAEGLAYLHHDCVPPIVHRDIKANNILIGLEFEPYIADFGLAKLVDDGDFGRSSNTVAGSYGYIAPGEFEFVSEYGYMMKITEKSDVYSYGKQPIDPTIPDGLHVVDWVRQKKGLEVLDPSLLSRPESEIEEMMQALGIALLCVNSSPDERPTMRDIAAMLKEIKHEREEYAKFDVLLKGSPANGAASCGNKSFGGVVPTSSSSVPGMQNLKTKSNNSSFSVSSLLHSSSSVKLVRTFSSHLLFGLLRVRHG 1154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr16621g00001 1154 Gene3D Ribonuclease Inhibitor 160 232 IPR032675 -
Mupr16621g00001 1154 Gene3D Ribonuclease Inhibitor 47 159 IPR032675 -
Mupr16621g00001 1154 Gene3D Transferase(Phosphotransferase) domain 1 874 1081 - -
Mupr16621g00001 1154 SMART LRR_typ_2 641 660 IPR003591 -
Mupr16621g00001 1154 SMART LRR_typ_2 568 592 IPR003591 -
Mupr16621g00001 1154 SMART LRR_typ_2 424 448 IPR003591 -
Mupr16621g00001 1154 SMART LRR_typ_2 664 689 IPR003591 -
Mupr16621g00001 1154 SMART LRR_typ_2 496 519 IPR003591 -
Mupr16621g00001 1154 SMART LRR_typ_2 304 328 IPR003591 -
Mupr16621g00001 1154 SMART LRR_typ_2 159 183 IPR003591 -
Mupr16621g00001 1154 SMART LRR_typ_2 593 616 IPR003591 -
Mupr16621g00001 1154 Gene3D Phosphorylase Kinase; domain 1 773 873 - -
Mupr16621g00001 1154 Gene3D Ribonuclease Inhibitor 445 708 IPR032675 -
Mupr16621g00001 1154 ProSiteProfiles Protein kinase domain profile. 787 1071 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr16621g00001 1154 SUPERFAMILY L domain-like 64 412 - -
Mupr16621g00001 1154 SUPERFAMILY RNI-like 369 683 - -
Mupr16621g00001 1154 SUPERFAMILY Protein kinase-like (PK-like) 765 1064 IPR011009 -
Mupr16621g00001 1154 FunFam LRR receptor-like serine/threonine-protein kinase 542 617 - -
Mupr16621g00001 1154 Gene3D Ribonuclease Inhibitor 240 345 IPR032675 -
Mupr16621g00001 1154 Pfam Protein tyrosine and serine/threonine kinase 791 1062 IPR001245 GO:0004672|GO:0006468
Mupr16621g00001 1154 ProSitePatterns Serine/Threonine protein kinases active-site signature. 918 930 IPR008271 GO:0004672|GO:0006468
Mupr16621g00001 1154 PRINTS Leucine-rich repeat signature 641 654 - -
Mupr16621g00001 1154 PRINTS Leucine-rich repeat signature 499 512 - -
Mupr16621g00001 1154 Gene3D Ribonuclease Inhibitor 346 444 IPR032675 -
Mupr16621g00001 1154 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 336 1063 - -
Mupr16621g00001 1154 SMART serkin_6 787 1067 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr16621g00001 1154 FunFam Putative LRR receptor-like serine/threonine-protein kinase 622 707 - -
Mupr16621g00001 1154 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 219 442 - -
Mupr16621g00001 1154 ProSitePatterns Protein kinases ATP-binding region signature. 793 816 IPR017441 GO:0005524
Mupr16621g00001 1154 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g34110 770 873 - -
Mupr16621g00001 1154 Pfam Leucine rich repeat N-terminal domain 50 85 IPR013210 -
Mupr16621g00001 1154 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 874 1081 - -
Mupr16621g00001 1154 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 443 537 - -
Mupr16621g00001 1154 ProSiteProfiles Leucine-rich repeat profile. 643 665 IPR001611 GO:0005515
Mupr16621g00001 1154 FunFam Nuclear pore complex protein NUP107 43 201 - -
Mupr16621g00001 1154 Pfam Leucine rich repeat 113 172 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr16621g00001 Mupr-Chr16621 2592 7303 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr16621g00001 41 1082 Receptor kinase-like Gene Family AT5G56040 47.467 0.0 943
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Mupr16621g00001 PK_Tyr_Ser-Thr 3.6e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr16621g00001 - - gmx:100818541 1920.59