Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr1657g00001 ATGAGGAAAAAAAGTAGGGGAAGGAAACGAAAACGTAGAAAGAACTCCAAAACAGGCACATGTAGAAGGAGGCCTGCTAATAATGCTTCTGAGCCTGAAGAGAAATTTGGATTCCAATCAGGGTCAGACTTCACGCTTAAAGACTTTCAGCAATATGCTGAGTTTTTTAAGGAATGCTACTTTGGGTTGAGAGATGCCAATGGAGACAGAATAGTTAGTGACAGTAACCATCAGAAGAGATGGGAGCCCTCTGAGGAGGAAATTGAAGGTGAATACTGGCGAATAATTGAGCAACCAACTGATGAGGTTGAGGTGTATTATGGGGCTGACTTGGAAACTGGAGCACTTGGAAGTGGTTTTCCTAAGGCATCATCCTTAACTAAGAGTGGCTCAGTCTCAGATCAATATACCCTGTCTGGCTGGAATCTGAACAACTTTCCGCGACTGCCAGGTTCCGTACTAAGTTATGAAGGAAGTGACATATCAGGAGTTCTAGTGCCATGGCTGTATGTTGGCATGTGCTTTTCATCATTTTGCTGGCATGTTGAGGACCATCACCTTTATTCACTAAACTATTTGCACTGGGGTGACCCAAAAGTATGGTATGGAGTACCTGGAAGCCATGCTCCAGCCTTGGAAAATGTAATGAGGAGGCACTTGCCTGATTTATTTGAGGAACAACCAAATCTACTCAATGAACTGGTTACCCAGTTTTCTCCTTCAATTCTTAAATCTAAGGGAGTGCCTGTGTATCGCACTGTTCAGCATTCTGGGGAATTTGTTATTACCTTTCCAAGGGCATACCATTCTGGCTTCAATTGTGGCTTCAACTGTGCAGAGGCAGTGAATGTGGCTCCTATTGATTGGTTAATGCATGGACAGAATGCTGTTGAGCTTTACAGTTTACAATGCCGTAAGACATCATTGTCACATGACAAGCTGTTATTTGGATCAGCACTGGAAGCTGTACGAGCCCTTGCAGAGCTAGCTCTTGGAAAGGAAACTCCAAAAACTTTGAAATGGAGTAGTGTCTGTGGGAAAGATGGGGATCTTACTAAGGCAGTTAAGGCAAGGATAAAGATGGAAGAAGAAAGGCTAGACTGTCTTCCAACTCATCTTAAGTTGCTTAAGATGAACAGTGACTTTGATTTGTACCAGGAAAGAGAATGTTTCTCTTGCTTCTATGACTTGCACCTATCTGCTGTGGGTTGTGAGTGCTCTCCTGACAGATATTCTTGTCTTAAGCATGCTAATATGTTCTGCTCGTGCGGAATGGAGAAAAGATTTGTTCTACTTCGATATACTTTAAATGACTTAAATAAATTGGTTGAAGCATTAGAAGGAGAATCACCTGCCATTGAGTCGTGGGCAAATAAAAACTTTGGAATGGTTTCTGCCAATGCCAATGAGATTTGCATAGATAAACCAGATGTTGAGCAAGATATGTACAAAACTAAGAATCATGAAGAAAGGGAGAGCTCAACTGGCTATTTAGGAACCAAGAATAGGTCAAATTTAAACGCACCTAGCAGTCCTACTAGTCATATTACTTCAGAGATAGTGCAGTCTGAGTCTCACCTTGTAACTTTTAGTGCAGCATATGACAGTATAGATAGTCATAATGACAATAATAATGATAAAAAGTTGGTCACAGACATAAAAGATAAAGTGGATCAGGCAGGTTCTCTGGATTTGAATGTTGATGTTATCTCTGGTGAAAATGAAAATCATTTGCTGCATATCACTGATAACCATCACGATAAAGGCATTTCAGTAGAGGGAAAAATATGCTGTTCAGAGGCCAGAATGGAAGTAGACAACATGAGAATTGGTGTTGAGGCAAATCTGTCAAACTCGTTTTCTGTTCTAAAGGGAGATTTTTCATCATCATGTTCAAGGGATGTTTGCAATTATTGTACATCTGATGGTGGAAAAATTGAGCTGGATCTGCAAACAGATTCAGATTCAAGAAAGCTGCACAACAATCTATATAAAAGGGAAGTTGTAGACACCACAGATATTACTATGTCTTTGACAGATGAAAGCTGCTTAGTGCAAATCTTTGGTAGTTCTGTCAAGCCTGTAAGTTTGGGATCTGTTGTTCATGGAAAGCTGTGGTGCAGTAAGCATGCTATATATCCAAAAGGATTCAAGAGTCGAGTTAACTTCTTTAGCATTCTTGACCCAACAAGAATCTGTAGCTATATTTCTGAAGTCATTGATGCTGGATTTCTTGGACCTCTTTTCAAGGTAACCATGGAAGAATGTCCAAGTGAGGGTTTCACAGATACCACAGCAGATAATTGCTGGGAATCAGTTCTGAAGAGATTACATCATGAAATCATGAGGCGAAGGAGTCTAGGTGAACTAGAACTTCCGCCCTTAGAGCTCCTGAAAAGTATTAACGGTCATAGAATGTTTGGCTTCCTTTTACCATCTATTATTCAGGCCGTCGAAGCTCAAGATCCTAGTCATCTGTGTGTAGAGTACTGGAATCACAAAGTTGGCCCTTCAGGCAGTGTTGTTGATAACTTCACATGTGGTTCCAGTAGCTCTTTAGGTAATATCAATACCAAAATTTTTGGTATCGATTTGATTAAGCAGGAAAAGCATAACACCCTTGAAGAGATGAAACCAATACTGCAAAGGGCAAGTCCTGATGAGTTAAGCACAATGCACAAGTTACTCAGCTCTGATGCACAGTGCTGTGAGTGGAGAGTGGCATTGATAGGACTGATGGATGAGTTCCGGAAAGCTTGTCAATAA 2766 0.4082 MRKKSRGRKRKRRKNSKTGTCRRRPANNASEPEEKFGFQSGSDFTLKDFQQYAEFFKECYFGLRDANGDRIVSDSNHQKRWEPSEEEIEGEYWRIIEQPTDEVEVYYGADLETGALGSGFPKASSLTKSGSVSDQYTLSGWNLNNFPRLPGSVLSYEGSDISGVLVPWLYVGMCFSSFCWHVEDHHLYSLNYLHWGDPKVWYGVPGSHAPALENVMRRHLPDLFEEQPNLLNELVTQFSPSILKSKGVPVYRTVQHSGEFVITFPRAYHSGFNCGFNCAEAVNVAPIDWLMHGQNAVELYSLQCRKTSLSHDKLLFGSALEAVRALAELALGKETPKTLKWSSVCGKDGDLTKAVKARIKMEEERLDCLPTHLKLLKMNSDFDLYQERECFSCFYDLHLSAVGCECSPDRYSCLKHANMFCSCGMEKRFVLLRYTLNDLNKLVEALEGESPAIESWANKNFGMVSANANEICIDKPDVEQDMYKTKNHEERESSTGYLGTKNRSNLNAPSSPTSHITSEIVQSESHLVTFSAAYDSIDSHNDNNNDKKLVTDIKDKVDQAGSLDLNVDVISGENENHLLHITDNHHDKGISVEGKICCSEARMEVDNMRIGVEANLSNSFSVLKGDFSSSCSRDVCNYCTSDGGKIELDLQTDSDSRKLHNNLYKREVVDTTDITMSLTDESCLVQIFGSSVKPVSLGSVVHGKLWCSKHAIYPKGFKSRVNFFSILDPTRICSYISEVIDAGFLGPLFKVTMEECPSEGFTDTTADNCWESVLKRLHHEIMRRRSLGELELPPLELLKSINGHRMFGFLLPSIIQAVEAQDPSHLCVEYWNHKVGPSGSVVDNFTCGSSSSLGNINTKIFGIDLIKQEKHNTLEEMKPILQRASPDELSTMHKLLSSDAQCCEWRVALIGLMDEFRKACQ 921
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr1657g00001 921 MobiDBLite consensus disorder prediction 1 37 - -
Mupr1657g00001 921 SMART fyrn_3 698 742 IPR003888 GO:0005634
Mupr1657g00001 921 MobiDBLite consensus disorder prediction 497 514 - -
Mupr1657g00001 921 MobiDBLite consensus disorder prediction 1 20 - -
Mupr1657g00001 921 SMART cupin_9 135 301 IPR003347 -
Mupr1657g00001 921 MobiDBLite consensus disorder prediction 486 514 - -
Mupr1657g00001 921 SUPERFAMILY Clavaminate synthase-like 138 321 - -
Mupr1657g00001 921 Gene3D - 689 828 - -
Mupr1657g00001 921 ProSiteProfiles FYR domain FYRN motif profile. 684 742 IPR003888 GO:0005634
Mupr1657g00001 921 FunFam Putative lysine-specific demethylase JMJ16 690 828 - -
Mupr1657g00001 921 Pfam JmjC domain, hydroxylase 168 284 IPR003347 -
Mupr1657g00001 921 Pfam C5HC2 zinc finger 390 442 IPR004198 -
Mupr1657g00001 921 Pfam F/Y-rich N-terminus 695 739 IPR003888 GO:0005634
Mupr1657g00001 921 ProSiteProfiles JmjC domain profile. 135 301 IPR003347 -
Mupr1657g00001 921 Gene3D Cupin 3 307 - -
Mupr1657g00001 921 ProSiteProfiles FYR domain FYRC motif profile. 744 834 IPR003889 GO:0005634
Mupr1657g00001 921 PANTHER LYSINE-SPECIFIC DEMETHYLASE 12 712 - -
Mupr1657g00001 921 Pfam F/Y rich C-terminus 746 834 IPR003889 GO:0005634
Mupr1657g00001 921 SMART fyrc_3 748 840 IPR003889 GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr1657g00001 Mupr-Chr1657 1410 10649 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr1657g00001 11 916 JUMONJI Transcription Factor Family AT4G20400 45.054 0.0 740
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Mupr1657g00001 JmjC 4.6e-47 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr1657g00001 K11446 - gmx:100801775 1600.1