Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr16572g00001 ATGGGAGAAGGAAGTGACCATCAAGCTATGGCAGATGATGGAAATGTTGAACCTAGTGAAGGTGGAGTTAATAATGCCGAAAACTCTGGCTCTCATGTTGAGGTTGGGGTTTCTGAGCCATATGTGGGTATGGAATTTGATTCAGAAGATGGTGCAAAGACTTTCTACAATGAGTATGCCAGACGAGTGGGTTTCAGCTGCAAAGCTGGTCCGCATGGTCATTCCAAAGCTGATGGGGCAAATATGTACTGGGAATTTGTGTGTGGCAGGGAGGATTTGAAAAGAAAACCTACTGAAAGTTGCAATGCAATGATTAGGTTCGAGCAAAAGGGTCAAAATAAGTGGATTGTTACAAATTTTGTGAGGGAGCATAGCCATTCCATGGCGAGCCATAGTAAGGTGCATAATATTCGGCCACGTAAGCACTTTTCTAGTGTTGGAAGAACCATGCCTGAAACTTACCAGGGAGTGGGGCTTGTTCCAAGTGGTGTGATGTATGTATCTATGGATAGGAATTGCATTCCCACTAAGAATATTAATGGGATTAGGAATATTCCTCCTGCATCTGCTACTGCTGCGGGAACAATTCACCTGGTTAAAAGTCCTACACTGATGAATCATGTTGTTAGGCCACCTACTCGAAAGAGGACATTAGGGAGGGATGCTCAGAACCTGCTGGAGTACTTTAAGAAAATGCAAGCTGAGAACCCTGGTTTCTTCTATGCAATACAACTTGATGAAGATAATCATATGTCTAATGTGTTTTGGGCAGATGCAAGATCTAGGACTGCTTACAGTCATTTTGGTGATGCAGTTACTCTGGACACAACATACAGAATAAATCAATATAGAGTGCCATTTGCTCCATTCACTGGGGTTAACCATCATGGTCAGATAATTTTGTTTGGTTGTGCACTCCTTTTGGATGATTCTGAGGCTTCTTTTGTGTGGCTCTTTAAGACATTTCTGACAGCAGTGAATGACCATTACCCTGTCTCTATCACTACTGATCAAGACAGAGCCATACAGACAGCTGTTTCACAAGTTTTTCCTCAAACACGCCACTGTATAAGCAAATGGCATGTCTTGCGAGAAGGCCAGGAAAAGTTGGCCTATGTATGCAACATGCATCCAAATTTTCAGATTGAACTTTATAATTGTATTAATCTGACAGAAACAGTTGAGGAGTTTGATTCATCTTGGAATTCTATCATCACTAAATATGATCTCAGTAGAAATGATTGGCTTCAGTCCTTGTACAGTGCTCGTGCTCAATGGGTTCCAGCATATTTTCGTGATTCATTTTTTGCAGTAATATCTCTTAATGAAGGTTTTGATGGTTCTTTTTTTTATGGTTTTGTGAACCAGCAGACAACATTACCAATGTTCTTTAGGCAGTATGAAGGAGCTTTGGAGAGATGGTTTGAAAAAGAATTAGAATCAGATTATGAGACAATTTGCACCACCCCTGTTCTGAAGACACCTTCCCCAATGGAGAAGCAGGCTGCTAATCATTATACGCGAAAAATATTTTTAAAGTTTCAAGAAGAGCTAGTTGAAACTTTTGCTTATACTGCCAACATAATTGAAGAAGGAGGAGCAAATAGCATATTCAGGGTTGCAAAATTTGAGGATGCCCAAAAGACTTATATTGTCACATTAAACCATTCTGAGTTGAGAGCTAACTGTAGTTGCCAAATGTTTGAGTATTCAGGCATTCTTTGTAGACATGTTCTAACTGTTTTTACTGTGACTAATGTACTTACATTACCATCTCATTACATTTTAAAACGGTGGACAAGAAATGCAAAAAGCAGTGCTGGATCTGATGAATTTGCTGGTAAATCACATGGACACAAGTCTTTGACATCACGGTATAGCAATCTTTGTTGGGAAGCCATCAAATATGCTGAAGAAGGGGCAATAACTGTGGAAACTTACGATGCTGCAATGAGTGTTCTTAGAGAAGGTGGAAAGAATATTTCTTTCATGAAGAGAAGTGTTGCCAAAGTTGCCCATCATCCGGGCAGTGGGACTGCTTATGACGACAGAAAGTCCCCTGCTTCAACAGCAGATACAACCCCTCTTTTATGGCCATTGCAGGATGAAACAACAAAGAGGTTTAATCTCAATGATGCCGGTACTCCTGTTCAATCAGTTGCTGATCTAAATTTACCGCGAATGACCCCAGTGTCTCTTCGGCGAGATGATGGTCCACCTGAAAACATGGTGGTTTATCCATGTCTGAAATCATTGACATGGGTAATGGAGAACAGGAACTCAACTCCAGGGAATAGAGTAGCTGTTATCAATCTTAAGTTGCAAGATTATAGCAGGATTCCTGCAACAGAATCGGAGGTTAAGTTTAATCTCTCAAAAGTTACCTTGGAACCATTGTTTAACCATATGGTCAACATCAGTGATCAGCTTTCCGCACCAACAAGGAAGTTTGCTGTATTAAATCTCAAG 2469 0.4058 MGEGSDHQAMADDGNVEPSEGGVNNAENSGSHVEVGVSEPYVGMEFDSEDGAKTFYNEYARRVGFSCKAGPHGHSKADGANMYWEFVCGREDLKRKPTESCNAMIRFEQKGQNKWIVTNFVREHSHSMASHSKVHNIRPRKHFSSVGRTMPETYQGVGLVPSGVMYVSMDRNCIPTKNINGIRNIPPASATAAGTIHLVKSPTLMNHVVRPPTRKRTLGRDAQNLLEYFKKMQAENPGFFYAIQLDEDNHMSNVFWADARSRTAYSHFGDAVTLDTTYRINQYRVPFAPFTGVNHHGQIILFGCALLLDDSEASFVWLFKTFLTAVNDHYPVSITTDQDRAIQTAVSQVFPQTRHCISKWHVLREGQEKLAYVCNMHPNFQIELYNCINLTETVEEFDSSWNSIITKYDLSRNDWLQSLYSARAQWVPAYFRDSFFAVISLNEGFDGSFFYGFVNQQTTLPMFFRQYEGALERWFEKELESDYETICTTPVLKTPSPMEKQAANHYTRKIFLKFQEELVETFAYTANIIEEGGANSIFRVAKFEDAQKTYIVTLNHSELRANCSCQMFEYSGILCRHVLTVFTVTNVLTLPSHYILKRWTRNAKSSAGSDEFAGKSHGHKSLTSRYSNLCWEAIKYAEEGAITVETYDAAMSVLREGGKNISFMKRSVAKVAHHPGSGTAYDDRKSPASTADTTPLLWPLQDETTKRFNLNDAGTPVQSVADLNLPRMTPVSLRRDDGPPENMVVYPCLKSLTWVMENRNSTPGNRVAVINLKLQDYSRIPATESEVKFNLSKVTLEPLFNHMVNISDQLSAPTRKFAVLNLK 823
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr16572g00001 823 Pfam SWIM zinc finger 550 584 IPR007527 GO:0008270
Mupr16572g00001 823 Pfam FAR1 DNA-binding domain 54 128 IPR004330 -
Mupr16572g00001 823 Pfam MULE transposase domain 272 363 IPR018289 -
Mupr16572g00001 823 ProSiteProfiles Zinc finger SWIM-type profile. 550 586 IPR007527 GO:0008270
Mupr16572g00001 823 MobiDBLite consensus disorder prediction 1 34 - -
Mupr16572g00001 823 SMART 26again6 561 588 IPR006564 GO:0008270
Mupr16572g00001 823 MobiDBLite consensus disorder prediction 674 694 - -
Mupr16572g00001 823 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 27 661 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr16572g00001 Mupr-Chr16572 846 3657 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Mupr16572g00001 MULE 8.2e-24 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr16572g00001 - - gmx:100807296 1454.88