Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr16569g00001 ATGGGTGACAAAAACATAGGCAAAGTCTCAGAGAGAGAAGGCTTTAAGTACAAGTTCAGAGCTTCAAGTGCAGGTGCAAGTGACACCTGTCCAGAAGATGGGGTGATTAAAGAGCAAGATCGGTTGCTTCCAATAGCCAACGTGGGGCGCATCATGAAGCAAATCCTTCCTCCTAACGCCAAGATCTCGAAGGAAGCTAAGGAAACCATGCAGGAATGTGTCTCCGAGTTCATTAGCTTTGTCACTGGGGAAGCTTCTGACAAGTGTCACAAAGAGAAGCGCAAGACTGTGAATGGCGACGATATTTGCTGGGCCTTGGCTACCCTAGGGTTTGATGACTATGCTGACCCACTTAAAAGGAGTCAAATCCACAATCTTGAAAAACTAAAATCTATACTATTCGAAGAAACAGAGGATAAGAAGACTAAGTAG 432 0.4491 MGDKNIGKVSEREGFKYKFRASSAGASDTCPEDGVIKEQDRLLPIANVGRIMKQILPPNAKISKEAKETMQECVSEFISFVTGEASDKCHKEKRKTVNGDDICWALATLGFDDYADPLKRSQIHNLEKLKSILFEETEDKKTK 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr16569g00001 143 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 28 121 IPR027113 GO:0001228|GO:0006355|GO:0016602
Mupr16569g00001 143 ProSitePatterns NF-YB/HAP3 subunit signature. 73 89 IPR003956 GO:0005634|GO:0006355|GO:0043565
Mupr16569g00001 143 PRINTS CCAAT-binding transcription factor subunit A signature 70 88 - -
Mupr16569g00001 143 PRINTS CCAAT-binding transcription factor subunit A signature 89 107 - -
Mupr16569g00001 143 PRINTS CCAAT-binding transcription factor subunit A signature 108 126 - -
Mupr16569g00001 143 SUPERFAMILY Histone-fold 39 120 IPR009072 GO:0046982
Mupr16569g00001 143 Gene3D Histone, subunit A 32 143 IPR009072 GO:0046982
Mupr16569g00001 143 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 42 106 IPR003958 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr16569g00001 Mupr-Chr16569 7824 9506 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr16569g00001 32 120 CCAAT-HAP3 Transcription Factor Family AT2G47810 86.517 3.41e-54 166
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Mupr16569g00001 CBFD_NFYB_HMF 7.7e-28 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr16569g00001 K08065 - gmx:100817274 213.001