Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr16566g00001 ATGGAGATCTTAGACCCTGCCACAGGTAAGACCTACAACCTCCCCGTTGGGTTCAGGTTCGACCCCACTGATGATGTCCTTGTTGGTTACTACCTGAGGAAGAAGACGTTATGCAAACCACTCCCTAATGACCTCATCCCAGACTATGATGTCTTCCAATCTGAGCCTTGGGCACTGCCAGGAGGTGAGAAGCATTTGAATTGGCAAAGGTTTTTCTTCTATGATACTAGGACCCGTGTGTTTGAAAACCCTGACAAGAGAGGTGCTGGAAATGGCCAGTGGAGAGTAGTGGAGAAATGTGAAGATGTTGAGCTCCCTACCAAACTACAGGTGATTTCCAAGAGGAACATGTTGGTTTTTTGGGAAGCCAAAGGAAACAGTTTTACCAAAACAAATTGGGCGATGCATGAGTTTCGCCTTGCCCCAAAATCAAATCAATCTCAGATGTTTGATTTGGCTGTGTATCGCATATTCAAGATGAAGCAGGCAAGAAATGGGAAGAAGAGTTTGAAGTTTAATAGTGCATATTGTGACACACTACAAGAAAAGTAA 552 0.442 MEILDPATGKTYNLPVGFRFDPTDDVLVGYYLRKKTLCKPLPNDLIPDYDVFQSEPWALPGGEKHLNWQRFFFYDTRTRVFENPDKRGAGNGQWRVVEKCEDVELPTKLQVISKRNMLVFWEAKGNSFTKTNWAMHEFRLAPKSNQSQMFDLAVYRIFKMKQARNGKKSLKFNSAYCDTLQEK 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr16566g00001 183 Pfam No apical meristem (NAM) protein 15 140 IPR003441 GO:0003677|GO:0006355
Mupr16566g00001 183 PANTHER NAC TRANSCRIPTION FACTOR 56 14 166 - -
Mupr16566g00001 183 ProSiteProfiles NAC domain profile. 14 160 IPR003441 GO:0003677|GO:0006355
Mupr16566g00001 183 Gene3D NAC domain 23 165 IPR036093 GO:0003677|GO:0006355
Mupr16566g00001 183 SUPERFAMILY NAC domain 10 159 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr16566g00001 Mupr-Chr16566 735 7670 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr16566g00001 14 165 NAC Transcription Factor Family AT5G13180 36.538 4.17e-25 95.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mupr16566g00001 NAM 5.9e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr16566g00001 - - ccaj:109807086 239.58