LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mupr16563g00001	ATGCGGTGGAGGGAGAGCGAGAAGAAACCTCCGAGAATGGAACCGCCGGACGACCTCCGATGCGGGCGGAACGACGGCAAGTCATGGCGGTGCGGCCACTGGAGGATTCACGATAATGTCTACTGCGAGGAGCATTTCCTTTCCACCAGAGCCAAGTCCGCTCGCGTCACCTACTCCGAACCAAGTAAACCTAAGGCTTCTACTTCTTCTGCGCAAAGAGACAATGAGAAGAAGAAGAAGAAGAAGAACTTGAAGAGGCCTCGAGAGCGAGACGAAGAGACTGCTCCGGAGAAAGCCAAAAATAAGAAGGTGAAGTTCGAAGCGGAACGAGAATCTCCGAAGGAGGAAGTGACGCTATTAATGGACAGGAAAGCCAGGAGCAGAGAGAGGATAAAGGAAATGCTTCGTCTAGAGGAGGACGATTTTAACATCGACGATGAAAAACCGGTCAGAACCACGAGGACGAAGTCTTCTTCGTCCAAGTCCAACGACGCGAAGCCGAGAGGCTCCCTCTCACAGTCTCAGATGTGTCATCAGTGCCAGAAAAGTGATAGGACCGTTGCTCGCTGTCAGAACTGTCGCAAACGATTTTGCGTCCCTTGCATTAGGAAATGGTATCCACAAATGTCCAAGGAGGCAATAACAGAATCTTGTCCATATTGTCAAGGCAATTGTAACTGCAAGGCATGTTTACGTAGAAAAGATGTAAATGCGGCAAGTACTTGCATAATGGATATGCCATCTCTTCATTTTGATTCTGGAGATTTAGGAGTGCCTCGAAATAAAGATGAAAAGATTCGACATTTGAAGCATTTGGTGCGAGCATTGTATCCTTTTCTGGAACAATTTAATCATGAGCAGCAGTTAGAAATGGAGATAGAAGCAAAAATTAAAGGTATGAGCTGCCCGAATTGTTCATATGATCTTTGCCTTACTTGTTGCCGGGAAATTCGTGGCAATTTCTTGCCAGGGGAAATAGTTGAGCAGTGTATTGATGTTTCTAATGCTGATTCCTATAGTGGAGAGTGTTTAGATCTGCACTCATGCAAGAAAGAATCATCAGACATTTGTCTTGAATCGAGCTCCAAGAGCTCTGAGAGACCAAAGAATTTGTGGAGGGCTATGAAAAATGGTGCGATCCCCTGTTCACCAAAGGATAATGATGGTTGTGGATATGAATATCTTGAGCTGAAGTGTATATTTCCTCAAAATTCGATTTCAAAGTTAAGGGAAAAAGTGAAAAGATTAATCAAAGTACATGGACTAAAAGATATGCCCATAGTTTCTGCACAGTGTAATTCCTGCTTCAAATCACATGATGAAATTGACTCCATCAACGAGAATTTGCGAAGAGCTGCCACTCGAGAAGGCTCAAGTGACAACTATTTGTATTGTCCTTCAGCTAGTGATGTTAAATGTGGGGATCTGGAACATTTTCAGGGCCATTGGATTAAGGGAGAACCGGTTATTGTTAGGAATGCTCTTGAGTTAACCTCTGGCTTGAGCTGGGAGCCAATGGTAATGTGGCGTGCAATGCGTGAATTGACTTATCATGGTTCCAAACATTTGAATGTGAAAGCAATTGACTGCCTAGATTGGTGTGAGGGATACTCGGAAGGTCGTGCTCATCGTGATTCCTGGCCTGAGATGCTTAAGCTCAAAGATTGGCCTCCATCTAATCTATTTGAGCAGAGGTTACCGCGTCATGGTATGGAGTTTATTAGTGCCTTACCCTACAAAGAGTATACACATCCCCACACTGGTTTTCTTAACATGGCCACAAAACTACCAGAAAAGTCTTTGAAACCTGACTTGGGGCCAAAGACATATATAGCATATGGCTTTGCTGAAGAGCTTGGACGTGGAGATTCTGTAACCAAGCTTCATTGTGACATGTCAGATGCGAGACTTGCTTTTGTATACAGGTTGGTGGTCTTAAGCTCATTGCATGGCATGGTAAATATTTTGACACATACCAAAGAGGTGACCTACACTTCTCAACACCTTACCAAAGTAGAGATGTTGAAACAAAAATATGTCGCTGAAGACCTAAGTGGACTTTTTAAGGTTTTGCAGAATGATAATTCTGCTGTGAAGTGCAAATCAACATTAGAAGAAAATATTTCATTGCAGGAAGCAAATGATTTGTCAGATCTTAATGGGTCTTCCCTTATCCAAATGTCAAAAATGGAAAATGATGGGCCCTGCATGAAGCATGCATTTGCTAAACCACCAAATGATAGCATTCTTGAGAAAAATGGTGAGGCTATGGCTTCTGATGGAGGACCAAATTCTTCTACACCTGGAGTTGAAGTTTTAGTAGATATTAATGCTCTAGTATTGCATGAGAATATCAGCATAAATTCTTCAAATGCTGTAACTGCTAATAGTGTGGAAAATCTTATGAAGGTAGATGAGAAGGAGCTCAATAAGTGTGATATTAACATGGTGGGTGTTGAAGCTAAGGAGAAATGGAGCAGTCCTAAGGATATTAAAGTTGGAGAAGCTAAGGAAGATTTTATCTCTTCACTTAGTAGAATAAATGGAGTGCAGGATGGGATTGTTAACAAAAGTGGAGCAAATTCAGGAATTTCATTGGAAAAGGAAACTGGTGAAATGATAAATTCTGTAGAAGGGAATGTGGTTATTGAGAGGGGAAGTGTAGTCAAATCACCGGGTGATTTAGATATGAAGTCAGAATTATATGCCATGAGTACCAAGGTTCAAATGGGAAAAAAGGATTGGAAGGAGGAAAATGTTGGGGATGTAAAAAAATCTAATACTGTTTTTTCCATCATGCATACTTCAACAAATGAGGCGCTGCAGCAGGATGCTGGATGTATTAATCATCCTGTGGACTCTGGAAATATGCACAGTGGACAAGAATTTGCCAAGGGAGGTGCTGTCTGGGATATTTTTCGGAGGCAAGATGTGCACAAGCTTGAGGAATACCTTAGGAGGCATTGCAGGGAATTCAGGCATCTCCGTTGTTCTCAAGTGGATGAGGTTTTTCACCCCATTCATGATCAAGTCTTTTATCTGACTTCTCATCATAAAAGGAAGCTCAAGGAAGAATTTGAATTTCACCACCTTCCCATTTATGCATTTGAGGGTCCTCTTACAGGAGTTGAACCTTGGACTTTTATACAAAACCTTGGTGAGGCTGTTTTTATACCTGCCGGGTGTCCCCATCAAGTTAGAAACTTAAAGTCGTGCATAAAGGTTGCTCTAGATTTTGTCTCTCCTGAAAATATCCAAGAGTGTATTCGTCTGACTGAGGAATTTCGTACTCTTCCCTCAAGCCACAAAGCAAAGGAAGACAAACTTGGGGTGAAAAAAATGTGTCTCCGTGCCTTAAGCAAGGCTGCAGACGATTTGGAGCACAGCTCGGAGGATGAGAAGAGTAGCAATTAA	3414	0.4236	MRWRESEKKPPRMEPPDDLRCGRNDGKSWRCGHWRIHDNVYCEEHFLSTRAKSARVTYSEPSKPKASTSSAQRDNEKKKKKKNLKRPRERDEETAPEKAKNKKVKFEAERESPKEEVTLLMDRKARSRERIKEMLRLEEDDFNIDDEKPVRTTRTKSSSSKSNDAKPRGSLSQSQMCHQCQKSDRTVARCQNCRKRFCVPCIRKWYPQMSKEAITESCPYCQGNCNCKACLRRKDVNAASTCIMDMPSLHFDSGDLGVPRNKDEKIRHLKHLVRALYPFLEQFNHEQQLEMEIEAKIKGMSCPNCSYDLCLTCCREIRGNFLPGEIVEQCIDVSNADSYSGECLDLHSCKKESSDICLESSSKSSERPKNLWRAMKNGAIPCSPKDNDGCGYEYLELKCIFPQNSISKLREKVKRLIKVHGLKDMPIVSAQCNSCFKSHDEIDSINENLRRAATREGSSDNYLYCPSASDVKCGDLEHFQGHWIKGEPVIVRNALELTSGLSWEPMVMWRAMRELTYHGSKHLNVKAIDCLDWCEGYSEGRAHRDSWPEMLKLKDWPPSNLFEQRLPRHGMEFISALPYKEYTHPHTGFLNMATKLPEKSLKPDLGPKTYIAYGFAEELGRGDSVTKLHCDMSDARLAFVYRLVVLSSLHGMVNILTHTKEVTYTSQHLTKVEMLKQKYVAEDLSGLFKVLQNDNSAVKCKSTLEENISLQEANDLSDLNGSSLIQMSKMENDGPCMKHAFAKPPNDSILEKNGEAMASDGGPNSSTPGVEVLVDINALVLHENISINSSNAVTANSVENLMKVDEKELNKCDINMVGVEAKEKWSSPKDIKVGEAKEDFISSLSRINGVQDGIVNKSGANSGISLEKETGEMINSVEGNVVIERGSVVKSPGDLDMKSELYAMSTKVQMGKKDWKEENVGDVKKSNTVFSIMHTSTNEALQQDAGCINHPVDSGNMHSGQEFAKGGAVWDIFRRQDVHKLEEYLRRHCREFRHLRCSQVDEVFHPIHDQVFYLTSHHKRKLKEEFEFHHLPIYAFEGPLTGVEPWTFIQNLGEAVFIPAGCPHQVRNLKSCIKVALDFVSPENIQECIRLTEEFRTLPSSHKAKEDKLGVKKMCLRALSKAADDLEHSSEDEKSSN	1137

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mupr16563g00001	1137	ProSiteProfiles	Zinc finger RING-type profile.	177	222	IPR001841	-
	Mupr16563g00001	1137	MobiDBLite	consensus disorder prediction	155	177	-	-
	Mupr16563g00001	1137	Pfam	WRC	16	54	IPR014977	-
	Mupr16563g00001	1137	PANTHER	JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN	63	1133	IPR045109	GO:0032454\|GO:0033169
	Mupr16563g00001	1137	Pfam	Zinc-finger domain of monoamine-oxidase A repressor R1	173	245	IPR018866	-
	Mupr16563g00001	1137	MobiDBLite	consensus disorder prediction	146	177	-	-
	Mupr16563g00001	1137	SMART	cupin_9	566	1096	IPR003347	-
	Mupr16563g00001	1137	ProSiteProfiles	WRC domain profile.	15	59	IPR014977	-
	Mupr16563g00001	1137	Pfam	JmjC domain, hydroxylase	1041	1079	IPR003347	-
	Mupr16563g00001	1137	Gene3D	Cupin	462	715	-	-
	Mupr16563g00001	1137	Gene3D	Cupin	897	1105	-	-
	Mupr16563g00001	1137	MobiDBLite	consensus disorder prediction	52	69	-	-
	Mupr16563g00001	1137	ProSiteProfiles	JmjC domain profile.	585	1096	IPR003347	-
	Mupr16563g00001	1137	MobiDBLite	consensus disorder prediction	1	25	-	-
	Mupr16563g00001	1137	MobiDBLite	consensus disorder prediction	51	121	-	-
	Mupr16563g00001	1137	SUPERFAMILY	Clavaminate synthase-like	470	1118	-	-
	Mupr16563g00001	1137	MobiDBLite	consensus disorder prediction	86	121	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mupr16563g00001	Mupr-Chr16563	1405	11689	Dispersed

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TR	Jumonji	Mupr16563g00001		JmjC	5.7e-10	CL0029

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mupr16563g00001	K15601		-	gmx:100808936	1652.49