Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr1655g00002 ATGAATTCCAAGGTACATAGCTCTGATGACACCAAGAAGGATGAAGAAGTTGTGCTTCCTGGCTTTAGATTCCACCCCACGGATGAAGAGCTTGTTGGGTTTTATCTTCATAGAAAAGTGGAAAAGAAGCCTCTTAGAATTGAACTCATCAAACAGGTTGATATCTACAAATATGATCCATGGGATCTTCCAAAGGTGAATTCTTTTGGGGACAAAGAATGGTATTTTTTCTGCTTGAGAGGGAGAAAGTACAGGAACAGTGTGAGGCCTAACAGGGTAACGAGGTCAGGGTTCTGGAAAGCCACTGGGATTGACAAGTCCATATATTGCGTGAAAGAACCCCATGAATGCATTGGCCTCAAGAAGTCTTTGGTCTACTACCGTGGAAGTGCTGGAAAAGGCACCAAAACTGACTGGATGATGCATGAGTTTCGCCTTCCACCCAATGCAAAACCCACTAACACCAATAGTCCACATGCTAATGCTACCAATGACGTTCAAGAAGCTGAGGTGTGGACACTCTGCAGGATATTCAAACGCACCCCATCTTTCAAAAAGTACAGTCCAAATTTGAAAGACTCAACATCAGTCACCAAACCAAACCCTGTGAATTCCAACAAATGCACCTTAGATTCTGAAAATTGCAAGCCATATTTGATTTGCAGAGACCCCCTAGCGATGCAACAAATAGAAAGGAAACCGGTTATTGGGCCGGTTGATGAAAAAAAACACTTGTTTCTGGGCCAGTTTGGCCCAATACCCCATCTTCAGGCCCCATCAACCCCTTACCCAAATATTTGGAATCAAAATGTTGAGGATTATGCATTTGCCAATGAGAATTGGGATGAGCTAAGATCTATGGTTCAGTTTGCCATTGATCCATCCTCG 888 0.4324 MNSKVHSSDDTKKDEEVVLPGFRFHPTDEELVGFYLHRKVEKKPLRIELIKQVDIYKYDPWDLPKVNSFGDKEWYFFCLRGRKYRNSVRPNRVTRSGFWKATGIDKSIYCVKEPHECIGLKKSLVYYRGSAGKGTKTDWMMHEFRLPPNAKPTNTNSPHANATNDVQEAEVWTLCRIFKRTPSFKKYSPNLKDSTSVTKPNPVNSNKCTLDSENCKPYLICRDPLAMQQIERKPVIGPVDEKKHLFLGQFGPIPHLQAPSTPYPNIWNQNVEDYAFANENWDELRSMVQFAIDPSS 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr1655g00002 296 ProSiteProfiles NAC domain profile. 18 180 IPR003441 GO:0003677|GO:0006355
Mupr1655g00002 296 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 15 205 - -
Mupr1655g00002 296 FunFam NAC domain-containing protein 35 27 183 - -
Mupr1655g00002 296 Pfam No apical meristem (NAM) protein 20 146 IPR003441 GO:0003677|GO:0006355
Mupr1655g00002 296 SUPERFAMILY NAC domain 14 179 IPR036093 GO:0003677|GO:0006355
Mupr1655g00002 296 Gene3D NAC domain 27 184 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr1655g00002 Mupr-Chr1655 23700 29893 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr1655g00002 8 181 NAC Transcription Factor Family AT5G39820 59.783 2.45e-74 229
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mupr1655g00002 NAM 8.6e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr1655g00002 - - gmx:100819795 545.814