Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr16555g00001 ATGGCCCTAGAGGCCGTGGTTTTCCCGCAAGATCCATTCACCTACGGTTGCAACAAAGACTACTTGTACTCGTTGGTAGGAGGAGGGAGCCATGACTACGATTTCCAAGCAGAGGAAGAGAAAGCCCTTGTGGGAATCATCAACAACAACATCGACCACACTCTGCATGCAAATTGGGATTCTTCTTCTCCTTCCGTGTTGCAAAATGTCAAAGACCAATGGGATTCACACTCCTCCCCTGAACCCTGCACCGTCGATCAATCCCTCCCCGGACCCTTCCCTCCTCCCCCTTCCTCCGCGGAAGCCGCCACCGGCCGCCGCAAACGACGTCGCACCAAAAGCGCCAAGAACAAGGAGGAGATCGAGAACCAGAGGATGACCCACATTGCAGTTGAGCGCAATCGAAGGAAACAGATGAACGAGTACCTCGCCGTGCTTAGATCTTTGATGCCTCCTTCTTATGTACAAAGGGGCGATCAAGCCTCAATTATTGGTGGCGCCATTAACTTCGTGAAGGAGTTGGAGCAGCTTCTGCAGTGCATGAAGGGCCAAAAAAGAACAAAGGAGGAAGGGCAGGTGAATGGGTTCTCTGACTCATCACCCTTTGCTGAGTTCTTCATGTTCCCTCAGTACTCGACACGTGCGACGCAGAGCAGCAGAGGCTACCCTGGCACGAGCGAGGCACGGAATCATTCATGGGCCGTGGCGGATATTGAAGTCACCTTGGTGGATGGCCATGCCAACATAAAGATACTCTCCAAGAAACGACCCGGGTTGCTTTTGAAGATGGTTGTTGGGCTTCAAACTTTGAGATTCACCATTCTCCACCTTAATGTTACCACTCTCGACGATATGGTCCTTTCCTCAGTTAGTGTTAAGGCAGAGGAAGGGTGTGAGCTGAACACGGTGGATGAAATTGCAGCTGCTGTGCATCAATTATCACGCACGGTCGAGGAGGAAGCTGTTTTCAGCTGA 975 0.5169 MALEAVVFPQDPFTYGCNKDYLYSLVGGGSHDYDFQAEEEKALVGIINNNIDHTLHANWDSSSPSVLQNVKDQWDSHSSPEPCTVDQSLPGPFPPPPSSAEAATGRRKRRRTKSAKNKEEIENQRMTHIAVERNRRKQMNEYLAVLRSLMPPSYVQRGDQASIIGGAINFVKELEQLLQCMKGQKRTKEEGQVNGFSDSSPFAEFFMFPQYSTRATQSSRGYPGTSEARNHSWAVADIEVTLVDGHANIKILSKKRPGLLLKMVVGLQTLRFTILHLNVTTLDDMVLSSVSVKAEEGCELNTVDEIAAAVHQLSRTVEEEAVFS 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr16555g00001 324 CDD bHLH_AtFAMA_like 126 193 - -
Mupr16555g00001 324 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 123 174 IPR011598 GO:0046983
Mupr16555g00001 324 SMART finulus 129 180 IPR011598 GO:0046983
Mupr16555g00001 324 FunFam Basic helix-loop-helix transcription factor 114 189 - -
Mupr16555g00001 324 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 123 189 IPR036638 GO:0046983
Mupr16555g00001 324 Gene3D - 106 190 IPR036638 GO:0046983
Mupr16555g00001 324 Pfam Helix-loop-helix DNA-binding domain 124 175 IPR011598 GO:0046983
Mupr16555g00001 324 PANTHER MAX DIMERIZATION, MAD 76 321 - -
Mupr16555g00001 324 MobiDBLite consensus disorder prediction 72 123 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr16555g00001 Mupr-Chr16555 14599 16669 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr16555g00001 1 293 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G72210 49.679 2.88e-80 244
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mupr16555g00001 HLH 6.8e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr16555g00001 - - gmx:100797856 522.316