Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr1654g00004 ATGAACATCACTGTTGATTCCGCGCTCCTCGCTTTTCTCTTCCCCTCCCTGCAGGAGATCAAAGTTGCCGTCGTTGCCTCCGTTTTCGTCATCATCGCCTACCGCTTCTTCGCCGGCCGAACCGGACACCTCCACGCCGATCCGTTGCTCTCCGATAATTCCGCCGCCGCCGATGCCGCCGACGACAAGGACAAGATGGGCCAGCCTAAAGTAGATTCTCAAACCAGTTCGGGGTACCTGATTAAGTTAGAACTATTGGCTGCTAAGAATCTTGTTGGTGCAAACATAAATGGCACGTCCGATCCTTATGCTATCATCACGTGTGGCAATGAAAAGCGTTTCAGTTCCATGGTCCCTGGTTCAAGAAATCCGATGTGGGGCGAGGAGTTCAATTTTTCTGTTGATGAACTTCCTGTCCAGATCAATGTCACAATTTATGATTGGGATATAATTTGGAAAAGTGCTGTTCTTGGTTCAGTGACTGTTCCAGTTGAAGGTGAAGGTCAAACTGGTGCAGTGTGGCATACTTTGGATAGCCCATCAGGGCAGTCATTAATTGACTGGGCGTATAGGATAAATGGTTATGGAGGAGCCAACCCTCGAAGAAGAATGCCACCCTTGGAAAATCAGGGGCCCACTGTAGTCCATCAAAAGCCAGGGCCTCTACAAACTATATTTGATCTTCATCCAGATGAGGTGGTTATTCCATTTGAAGATATAGATGAGATTCGAAGGAGTCAACATGCATTTATTAATCCTGCCATAACAATTATTCTTCGCATGGGTGCTGGTGGACATGGTGTCCCTCCTTTGGGAAGTCCTGATGGTAGGGTCAGATATATGTTTGCATCATTTTGGAACAGGAATCATGCCTTCAGAAATCTACAGCGTGCAGCAAAGGATTTCCATGAAATGTTGGAAGCTGAGAAGAAGGAAAATGCAGAGTCAGAGCTGCGTGCACATAGCAGTTCTGTCAGAGGAAGTAAGATACTGGATAAGGTTCCTGAAGAAAACATGCCAAAAACTGGAAAACTTCAACATTTTGTCAAAGAAGAGGCTTTAGTTGGTATATACAATGTAGGCATCGTTTTCTCCTTTTATCCTCTTGAGTTTAACTATCAGCTTTATTATTTGTACATAACTATTTTTCCCTGCACAGCTGAGCAGTTTTTTAACTTATTATTAAATGATGGTTCAAATTTTACAAACAAATATCGTTCAATAAGAAAGGACACTAATCTTGTGATGGGCCAGTGGCATACAGCAGACGAATATGATGGTCAAGTCCGAGAAATAACCTTCAGGTCCCTATGTAACAGCCCTATGTGCCCTCCAGACACAGCCATGACAGAGTGGCAACATCATGTTCTATCACCAGACAAGACAAACCTGGTGTTTGAAACTGTGCAGCAGGCACATGATGTTCCATTTGGATCCTACTTTGAGGTACACTGTAAATGGACATTGGAGCCAATTAATGAAAGCTCATGTACACTGGACATAAAAGTGGGTGCACATTTCAAGAAATGGTGTGTTATGCAATCAAAAATAAAGTCAGGGGCAGTCAATGAGTACAAGAAAGAAGTTGATGTGATGTTAGATGTTGCTCGTTCGTATGTAAAATCAAATACTTCTAATGACAAGAATGATGATGATAAGGCCTCTTCGCCCCCTGCAGAGACCCTGGAAAACTAA 1695 0.4354 MNITVDSALLAFLFPSLQEIKVAVVASVFVIIAYRFFAGRTGHLHADPLLSDNSAAADAADDKDKMGQPKVDSQTSSGYLIKLELLAAKNLVGANINGTSDPYAIITCGNEKRFSSMVPGSRNPMWGEEFNFSVDELPVQINVTIYDWDIIWKSAVLGSVTVPVEGEGQTGAVWHTLDSPSGQSLIDWAYRINGYGGANPRRRMPPLENQGPTVVHQKPGPLQTIFDLHPDEVVIPFEDIDEIRRSQHAFINPAITIILRMGAGGHGVPPLGSPDGRVRYMFASFWNRNHAFRNLQRAAKDFHEMLEAEKKENAESELRAHSSSVRGSKILDKVPEENMPKTGKLQHFVKEEALVGIYNVGIVFSFYPLEFNYQLYYLYITIFPCTAEQFFNLLLNDGSNFTNKYRSIRKDTNLVMGQWHTADEYDGQVREITFRSLCNSPMCPPDTAMTEWQHHVLSPDKTNLVFETVQQAHDVPFGSYFEVHCKWTLEPINESSCTLDIKVGAHFKKWCVMQSKIKSGAVNEYKKEVDVMLDVARSYVKSNTSNDKNDDDKASSPPAETLEN 564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr1654g00004 564 Gene3D - 223 301 IPR011993 -
Mupr1654g00004 564 MobiDBLite consensus disorder prediction 544 558 - -
Mupr1654g00004 564 SMART C2_3c 80 188 IPR000008 -
Mupr1654g00004 564 Pfam C2 domain 82 176 IPR000008 -
Mupr1654g00004 564 ProSiteProfiles VASt domain profile. 372 544 IPR031968 -
Mupr1654g00004 564 CDD C2 81 177 - -
Mupr1654g00004 564 ProSiteProfiles C2 domain profile. 65 177 IPR000008 -
Mupr1654g00004 564 Gene3D C2 domain 62 190 IPR035892 -
Mupr1654g00004 564 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 78 192 IPR035892 -
Mupr1654g00004 564 Coils Coil 292 312 - -
Mupr1654g00004 564 PANTHER BAG-ASSOCIATED GRAM PROTEIN 1 233 554 IPR044655 -
Mupr1654g00004 564 MobiDBLite consensus disorder prediction 542 564 - -
Mupr1654g00004 564 PRINTS C2 domain signature 120 133 IPR000008 -
Mupr1654g00004 564 PRINTS C2 domain signature 141 149 IPR000008 -
Mupr1654g00004 564 PRINTS C2 domain signature 96 108 IPR000008 -
Mupr1654g00004 564 Pfam VAD1 Analog of StAR-related lipid transfer domain 381 523 IPR031968 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr1654g00004 Mupr-Chr1654 44722 54771 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr1654g00004 68 165 C2H2 Transcription Factor Family AT4G21160 24.490 9.45e-07 49.3