Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr16542g00001 ATGAATGCAGGTGCAGCAGCACAGAGAGTCCACGCTATCGTGGGGATTGTTGAGCACGCGAGTGGGTGGCGCGTGGCGTGGATGAGTGAGAAGGCAAAGCGCACTCGTTTAGTTGATCACCGTTTACCTGCCGGTGACGGAATTCAAAAACACCCGCCTCTTTTTCTTTCTCACCAGAATCTGTTCCATTCATCTCCTCTGACTAGAGTACTTTTTCCTTTCACAGATCTGAAGATTGATGACAAATATTCTGGTTTGGGTATCAATAACAAAAATCAAGTTGAGATTGAGAAAATAATGGAAGCACATCCTACTTTCTCCATTGAAAGATCAAAGCAACTCAATAACATGGGGATGTCTGGAGCACTTTCTTCATCCTTTTCAGTCCTTCCAATACCCCCAGAAGAGATGTATCCCAAGCTGCCTGAATCACAGTTGGATTTTGTAGAACAAGAGCTTATGACAAGACCTTTTACTCATTCAAGTTATTTAAATTCCAGTGGAGTAGTTGGGCATATTTTTTCGTCTTCCCCTGGATATTCAACTGATCTTCATCGCTCATCTATTTCACCTGATGAAAAACACTCTTCTAGTGCTCATTTTATTTCACAATCATCACCTAACATGCCCCAATTTCCATTATCATATTCTTCAAATGCTGGACCACCAAATTCAGCAGCACCAAACCATTATTCCAAAGAAAACAGTGCTTCCTGGAATACAGATTCCCTGCCAAGCTTTCTGGATTTTCCTGCAAATGGCTCTATTGATAATAATCAGGTAGGAAGTAGTCCCTGCACTATCATGGCATCTGAGGAGTATTGTAAGCAAAATGATTGGCAGGAGTGGGCTGAGCGGCTAATCAGCGATGATGACACTTTGACTTCTAATTGGAATGACCTTCTTACTGACAGCATTCAAGATCTTGAGCCAAAGGTGCCATTCCAGGTTTCAAAACCATTTTCAGAGTTTCCAGGACATCAATCCCCAGGCCATCAACAACTTCCTGCTTCATATGGAGAAAATTGCACTGGTGCTGTCCTTTCTTCCTCAGTAAATTCTGCTCCTGCAAAGTCACGAATGCGTTGGACACCAGAACTTCATGAGGCATTTGTGGAGGCTGTCAACAAACTTGGGGGGAGTGAAAGAGCTACTCCGAAGGGCGTGCTGAAACTCATGAAAGTTGAAGGATTAACTATATATCATGTTAAAAGCCATTTGCAGAAATACAGGACAGCTAGATATAGACCAGAGTCATCTGAAGGAGTGATGGAGAAAAAAGCAAGTTCCATTGAAGAGATGTCATCTCTAGATTTGAAAACTGGTATTGAGATCACTGAAGCTCTACGACTACAAATGGAGGTTCAGAAGCGGTTGCATGAACAGCTTGAGATTCAAAGAAATCTACAACTGCGAATAGAAGAACAAGGAAGGTACCTCCAGATGATGTTTGAGAAGCAGTGTAAACCTGGAACTGAAACGTTGAAGGCACCATCATGTAGTCCATCTGGACTTTCTTCAAATGCTACGAGAGATTTCCCTGACAAAAATGAAATGGAAGCATCACAAGTGGACCATTGTAGGTCAGGACCTGATCAAGTTAACGGCAGTACCACAGTCCAGGAAGGCTCACTAGAAAAGGGTGGGAGGTCTGATTCTCCCAAAACTCAACATGCTATTGCTAGTGACGATAGTGCTCAAGCCACAAAGCGTCAAAGAACGGAGTAA 1728 0.4288 MNAGAAAQRVHAIVGIVEHASGWRVAWMSEKAKRTRLVDHRLPAGDGIQKHPPLFLSHQNLFHSSPLTRVLFPFTDLKIDDKYSGLGINNKNQVEIEKIMEAHPTFSIERSKQLNNMGMSGALSSSFSVLPIPPEEMYPKLPESQLDFVEQELMTRPFTHSSYLNSSGVVGHIFSSSPGYSTDLHRSSISPDEKHSSSAHFISQSSPNMPQFPLSYSSNAGPPNSAAPNHYSKENSASWNTDSLPSFLDFPANGSIDNNQVGSSPCTIMASEEYCKQNDWQEWAERLISDDDTLTSNWNDLLTDSIQDLEPKVPFQVSKPFSEFPGHQSPGHQQLPASYGENCTGAVLSSSVNSAPAKSRMRWTPELHEAFVEAVNKLGGSERATPKGVLKLMKVEGLTIYHVKSHLQKYRTARYRPESSEGVMEKKASSIEEMSSLDLKTGIEITEALRLQMEVQKRLHEQLEIQRNLQLRIEEQGRYLQMMFEKQCKPGTETLKAPSCSPSGLSSNATRDFPDKNEMEASQVDHCRSGPDQVNGSTTVQEGSLEKGGRSDSPKTQHAIASDDSAQATKRQRTE 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr16542g00001 575 MobiDBLite consensus disorder prediction 492 575 - -
Mupr16542g00001 575 FunFam Myb family transcription factor 357 415 - -
Mupr16542g00001 575 NCBIfam myb-like DNA-binding domain, SHAQKYF class 358 412 IPR006447 GO:0003677
Mupr16542g00001 575 Coils Coil 446 466 - -
Mupr16542g00001 575 MobiDBLite consensus disorder prediction 194 238 - -
Mupr16542g00001 575 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 337 547 IPR044848 GO:0003700
Mupr16542g00001 575 MobiDBLite consensus disorder prediction 494 512 - -
Mupr16542g00001 575 Pfam MYB-CC type transfactor, LHEQLE motif 443 489 IPR025756 -
Mupr16542g00001 575 Pfam Myb-like DNA-binding domain 360 411 IPR001005 -
Mupr16542g00001 575 Gene3D - 357 416 - -
Mupr16542g00001 575 MobiDBLite consensus disorder prediction 181 238 - -
Mupr16542g00001 575 SUPERFAMILY Homeodomain-like 356 412 IPR009057 -
Mupr16542g00001 575 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 355 415 IPR017930 -
Mupr16542g00001 575 MobiDBLite consensus disorder prediction 528 546 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr16542g00001 Mupr-Chr16542 9362 17050 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr16542g00001 152 487 G2-like Transcription Factor Family AT4G28610 53.043 4.48e-97 300
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Mupr16542g00001 Myb_DNA-binding 6.2e-09 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr16542g00001 - - gmx:100793593 824.313