Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr16533g00003 ATGGTGTCGAGCCAGGTGATGAAAGTGAAGAGAGATACGCTACGAACATGCATGATATGCCCTCTCTGCCATAAGTTCTTCAAAGATGCTACCACCATCTCTCTCTGCCTCCACACCTGTTCGTCTCTCTTCCCTTCGATTTCTTTGAAGTGCATATATGAGAAACTCTCGGACGAGGAGATGGATTGCTGTCCTGTGTGCAATATTGATCTAGGCTGCCTTCCCGTGGAAAAACTCAGGCCAGACCATAATTTGCAAGATATAAGGGCAAAAATATTCCCTTTTAAAAGAAAAAAGATCAAGGCCCAAGAAGTTTTGTCTTCAATATCATTGCCTGTAAAAAGGAAGGAAAGATCACTATCGTCATTGGTAGTCAGTGCTCCCAAAGTTTCAATGCAACCTGGCTTCACAGGAAAGAGAACAAAAACCAGTACAAGAAAGGCTGCTGCTTTACGTGGATGCAGTTTTCTTCTTGAAGAATCTGTAAAGAAGGATGAAACTAATGGTGGAGATAATATGGATTCTTCCTTGGCTGAGCCTTCTAAGAAGCATAAGCCCAATGAAGATACAGAGAAAAGTGTGGAACATACAGAAGGGAAAGTTGATCTCTGGACGCCACTGAACTGTCTTGTTGAAGCTGCCAACAGAACTAAGTCCTCCAGGTCAAATTCACAAGCAATTCCCCTCGCCAGATTAGAGTCCCCAACTACTCCTCGCGGTGGACAAGATACACCTGAAAATAAAACCAAAACAGACCTACCTGCTTCTGTCCAGGGTGAATTAAACATTCCAAAATCCAAAAATAAGGATACCGGACATAAAACAATATTTGGAGATGACAAGGATGCAAACAGCTTGCCTTCAGGACCAGTGAAGCGAAGAAGGTTGCGTCCTGCTGGTCAGAAAAGAGTTGCAGCATCTGAGATGTCTGCCTCATCCCCAGCCCCACTAGATGCATCAGGGGGCAAGTGCAACAGAAAAAACAGTGCTATTTGGTTTTCATTAGTTGCTTCAGAGGACCAGAAAGGAGATGTTCCATTGCCACAGATCTCAGCATGTTACTTAAGAATAAAGGATGGTACTGTGCCCGTCTCATTTGTTCAAAAATACCTTGTGAAGAAACTTAATCTTGCCAGTGAAGCAGAGGTGGAAATAATGTGCAGGGGTCAACCAGTGCTCCCATCTTTGCAACTGCATAATTTAGTAGATCTATGGTTCCGGACAGCATCAACTTCAAAAAAGATACCAGCTTCTGTGGGGTCCTCAGCCAAAGATTTTGTGATGGTTTTGTCATATTGTCGAAAGGTCTTGCCTCCTTGA 1320 0.4348 MVSSQVMKVKRDTLRTCMICPLCHKFFKDATTISLCLHTCSSLFPSISLKCIYEKLSDEEMDCCPVCNIDLGCLPVEKLRPDHNLQDIRAKIFPFKRKKIKAQEVLSSISLPVKRKERSLSSLVVSAPKVSMQPGFTGKRTKTSTRKAAALRGCSFLLEESVKKDETNGGDNMDSSLAEPSKKHKPNEDTEKSVEHTEGKVDLWTPLNCLVEAANRTKSSRSNSQAIPLARLESPTTPRGGQDTPENKTKTDLPASVQGELNIPKSKNKDTGHKTIFGDDKDANSLPSGPVKRRRLRPAGQKRVAASEMSASSPAPLDASGGKCNRKNSAIWFSLVASEDQKGDVPLPQISACYLRIKDGTVPVSFVQKYLVKKLNLASEAEVEIMCRGQPVLPSLQLHNLVDLWFRTASTSKKIPASVGSSAKDFVMVLSYCRKVLPP 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr16533g00003 439 MobiDBLite consensus disorder prediction 215 265 - -
Mupr16533g00003 439 MobiDBLite consensus disorder prediction 177 199 - -
Mupr16533g00003 439 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 4 115 IPR013083 -
Mupr16533g00003 439 MobiDBLite consensus disorder prediction 162 199 - -
Mupr16533g00003 439 MobiDBLite consensus disorder prediction 215 322 - -
Mupr16533g00003 439 MobiDBLite consensus disorder prediction 266 280 - -
Mupr16533g00003 439 Gene3D - 315 415 - -
Mupr16533g00003 439 PANTHER E3 UBIQUITIN PROTEIN LIGASE DRIP1 5 436 IPR044807 GO:0004842
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr16533g00003 Mupr-Chr16533 18238 23158 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr16533g00003 1 358 C3H Transcription Factor Family AT2G30580 41.689 1.05e-77 243
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr16533g00003 K16277 - gmx:100783999 783.482