Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr16528g00003 ATGAGCACCTACTTAGAGGCCACCACATCACGACCAATGCCACCCACCATAGAAGATGAAGATTTGGAGAACAACACGGGTACTAATGCAATGGTGAGAAAGAAATCAGAACTAGTTGTGGTCACAAATAATAACGCTCGTTTCCAAAAGCTTGGGAAGTTCATGGCCAATTTGCAAGAGGTCTTACTTGGCACTAAGCTTGTTGTGCTTTTTCCAGCGGTGCCTTTGGCTGTCGTTGCAAATTTTTGTAGCTTTGGAAGGCCTTGGATATTTGCTTTCAGCCTGCTTGGACTTGCACCGCTAGCTGAACTTGGCGGGCTTCTGAATGCAACATGTGGAAATGCAACCGAGATGATCATAGCATTATTAGCACTTCACCAGAACAAAGTACATGTTGTGAAGTTATCCCTGCTGGGTTCTATTCTCTCAAACCTTCTCTTGGTTCTTGGCAGTTCACTTCTCTGTGGTGGTTTAGCCAATCTTAAGAGAGAGCAAAGATATGACAGAAAACAGGCAGATGTAAACTCACTGCTTTTGTTGCTGGGGTTGCTGTGCCATTTGCTGCCATTGCTGTTCAAATACGCCTTAGGAGGGGGTGATCATTCTATAGCCACTAGCACTCTTCAGTTGTCCAGAGCAAGCAGTGTTGTTATGCTTCTAGCATACGTTGCTTACATCTTCTTCCAATTAAAAACTCATCGAAAATTGTTTGATGCACAAGAGGAGGATGAAGATGAAGAGAAGGCGGTGATAGGATTTTGGAGTGCTTTTACCTGGTTGGTGGGTATGACATTGGTCATATCTGTACTTTCTGAATATGTTGTTGGAACCATTGAGGCTGCTTCGGATTCTTGGGGCATTTCTGTAAGCTTCATTAGCATAATTTTGCTGCCAATTGTTGGAAATGCCGCAGAACATGCCGGTTCAATCATATTTGCTTACAAGAACAAGTTGGACATATCTTTGAGTGTTGCTATGGGATCTGCAACTCAAATTTCTATGTTTGTGGTTCCATTAAGTGTAGTTGTGGCATGGATAATGGGTATACGAATGGATTTAGACTTCAGCCTTCTTGAAACTGGATGTCTTGCTTTTACAATTATAGTTACAGCGTTCACTTTACAGGATGGAACTTCACACTACATGAAAGGAGTGGTTCTTACTCTATGTTACATTGTCATTGCTGCATGTTTTTTTGTTCTCAAAACTCCTCTAATCGACCAATATCCTAGGGCCAATTTTGGAGCTAAACCATTCTTTGAAGCCATCACCACTTGA 1278 0.4218 MSTYLEATTSRPMPPTIEDEDLENNTGTNAMVRKKSELVVVTNNNARFQKLGKFMANLQEVLLGTKLVVLFPAVPLAVVANFCSFGRPWIFAFSLLGLAPLAELGGLLNATCGNATEMIIALLALHQNKVHVVKLSLLGSILSNLLLVLGSSLLCGGLANLKREQRYDRKQADVNSLLLLLGLLCHLLPLLFKYALGGGDHSIATSTLQLSRASSVVMLLAYVAYIFFQLKTHRKLFDAQEEDEDEEKAVIGFWSAFTWLVGMTLVISVLSEYVVGTIEAASDSWGISVSFISIILLPIVGNAAEHAGSIIFAYKNKLDISLSVAMGSATQISMFVVPLSVVVAWIMGIRMDLDFSLLETGCLAFTIIVTAFTLQDGTSHYMKGVVLTLCYIVIAACFFVLKTPLIDQYPRANFGAKPFFEAITT 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr16528g00003 425 Gene3D - 250 400 IPR044880 -
Mupr16528g00003 425 Gene3D - 102 249 IPR044880 -
Mupr16528g00003 425 Pfam Sodium/calcium exchanger protein 256 397 IPR004837 GO:0016020|GO:0055085
Mupr16528g00003 425 Pfam Sodium/calcium exchanger protein 104 230 IPR004837 GO:0016020|GO:0055085
Mupr16528g00003 425 NCBIfam calcium/proton exchanger 103 399 IPR004798 GO:0006816|GO:0015369
Mupr16528g00003 425 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 32 402 IPR004713 GO:0006812|GO:0008324|GO:0016020
Mupr16528g00003 425 FunFam Vacuolar cation/proton exchanger 246 400 - -
Mupr16528g00003 425 NCBIfam calcium/proton exchanger 54 399 - -
Mupr16528g00003 425 FunFam Vacuolar cation/proton exchanger 102 245 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr16528g00003 Mupr-Chr16528 10278 15105 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr16528g00003 28 404 Antiporters AT2G38170 65.087 3.61e-173 491
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr16528g00003 K07300 - gmx:100802344 662.529