Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr16525g00001 ATGCAGATAATGTCTATTCTTGTAAAGATCCTCAATAAAATGAAAAGAATGGTTTGTGGTGAAAGTGAAAGTGTCTCAGGCAAGAAGAAGAGATTGATAATGAAAGAGCTTGTTAAGGGTCAGGAAGCTGCTACTCAACTCAAGCTTCTCCTTCAAAACCCCTTTGGGAGTGAAGTTTCTCTCTCTTCTCAGGAACTCATGACCATTGTCCTCACTTCTTTCACACAAGCCCTTTCTATTATTACCTCATCTTCTCTGGAACCTTCTTCTGCACATGACCTCACTCATCGGACTCTCCTCAATGCCTCGCCGGTGGCAACTTCCGGCAATGATCCAAGCAGTGACGGTGGGAACAGATCCCGAAAGGCTGGGAGAGGTCGCTACAATAGAAGGAGGAGTGCACTCGCATGGACCATAGTTTCTTGTGCCACTGATGATAATCATGCATGGAGGAAGTATGGACAAAAGCGAATCCAGAATTCTGAATTTCCTAGGTGTTACTTCAGGTGTAGTCACAAGTATGATCAAGGTTGTAGAGCAACCAAACAGGTGCAGCGGGATGAAGAGAATCCAAATATGTACCAAACTACGTACATTGGCATTCACACATGCAATGCCAGCTCCACAGATTCTACTGATTGGGAATCATATCTTGTGAATTCTGATCGTGACTCCAACCTACCAAATCTTCAAGATCGCCACATTATTAGTTCACCAAGCCTAACTATAAAACAACAATTTCCCAAAGAAGAGACACCAACAGATGTTATAGATCACAAGTTGGATCCTAACCTGTGGTCAGATTTGAACGATTTTCAACCATCCAAGCCTACCACTATGCCCTTACAGATGGAATCTGATAATGCAGATAATGAGTATTCATATACTGACTCTCAATGTCTGCTCATGGATTTTGGGGTGGCATCTGTTCATTTTGGCACTGATTTCCACTTTGACCAAAGTCAGTTGTTTTAA 975 0.4256 MQIMSILVKILNKMKRMVCGESESVSGKKKRLIMKELVKGQEAATQLKLLLQNPFGSEVSLSSQELMTIVLTSFTQALSIITSSSLEPSSAHDLTHRTLLNASPVATSGNDPSSDGGNRSRKAGRGRYNRRRSALAWTIVSCATDDNHAWRKYGQKRIQNSEFPRCYFRCSHKYDQGCRATKQVQRDEENPNMYQTTYIGIHTCNASSTDSTDWESYLVNSDRDSNLPNLQDRHIISSPSLTIKQQFPKEETPTDVIDHKLDPNLWSDLNDFQPSKPTTMPLQMESDNADNEYSYTDSQCLLMDFGVASVHFGTDFHFDQSQLF 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr16525g00001 324 SMART WRKY_cls 144 206 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mupr16525g00001 324 Gene3D WRKY domain 129 199 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mupr16525g00001 324 ProSiteProfiles WRKY domain profile. 145 207 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mupr16525g00001 324 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 35 216 IPR044810 GO:0003700
Mupr16525g00001 324 Pfam WRKY DNA -binding domain 145 205 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mupr16525g00001 324 MobiDBLite consensus disorder prediction 102 117 - -
Mupr16525g00001 324 MobiDBLite consensus disorder prediction 102 127 - -
Mupr16525g00001 324 SUPERFAMILY WRKY DNA-binding domain 141 206 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr16525g00001 Mupr-Chr16525 4329 14915 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr16525g00001 29 208 WRKY Transcription Factor Family AT3G56400 40.323 2.28e-37 133
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Mupr16525g00001 WRKY 1.2e-23 CL0274