Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr16515g00001 ATGTCTTATTGCTACTTCCCCTTCACGAAGATGGAGTTCAACACCCAAAACACTAACAAATCTGAGATAAGATGGAGCTCAGATGATCAAGGTGGTCTTGGACAAGTGAAATCTTATTCTTGTTCCTTTTGCAGGAGAGGGTTCTCAAATGCACAGGCACTAGGAGGCCACATGAATATCCATAGAAGAGATAGAGCCAAGCTCAAGCAATCTTCTGAGGAAAACTTGCTTTCATTAGACATCTCAATCAAGACGACAAATGATCATAACAATAATGACCCTTTGGAAGAGAAAATTTTGTTTAGGTTGGGTTCTGGTGAAGATCAGAAGCATGCTAGAAATCATAAAATGCCATTCACTTTCCCTCACAAAGATAATCATGCAGAAATTCCTCATCTTCCCTCTTTTGTTTTGGGGCAAAGGATTGAGGAGAAGAAAGCTGAGTTAGACCTTGAGCTTAGGTTAGGCCTCCACCCACAGGAGTCACCAACATTGAACACCAGAGCCTATTATTTAAAGTTGTTGCTTCGGAACTCTAAAAGGGCCAAGGGCTCTCAACTTAAGCCCCCCAAAATAACTAAGGCTCTTTGTGCCGCATTTTCTAATATTTCCTCTCACCGGTTATCCTAA 630 0.4143 MSYCYFPFTKMEFNTQNTNKSEIRWSSDDQGGLGQVKSYSCSFCRRGFSNAQALGGHMNIHRRDRAKLKQSSEENLLSLDISIKTTNDHNNNDPLEEKILFRLGSGEDQKHARNHKMPFTFPHKDNHAEIPHLPSFVLGQRIEEKKAELDLELRLGLHPQESPTLNTRAYYLKLLLRNSKRAKGSQLKPPKITKALCAAFSNISSHRLS 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr16515g00001 209 ProSitePatterns Zinc finger C2H2 type domain signature. 41 61 IPR013087 -
Mupr16515g00001 209 SUPERFAMILY beta-beta-alpha zinc fingers 37 65 IPR036236 -
Mupr16515g00001 209 ProSiteProfiles Zinc finger C2H2 type domain profile. 39 66 IPR013087 -
Mupr16515g00001 209 PANTHER OS07G0101800 PROTEIN 19 159 - -
Mupr16515g00001 209 Gene3D Classic Zinc Finger 15 94 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr16515g00001 Mupr-Chr16515 826 2780 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr16515g00001 22 103 C2H2 Transcription Factor Family AT2G37740 45.783 6.96e-18 78.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mupr16515g00001 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr16515g00001 - - ccaj:109793777 286.574