Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr16508g00004 ATGTTTGCAGTTGCACCATATTCCCCGGCGTCCACGCCCCCACTGCCGCCGTTCGACATCACTCCTCCGCCATTGCCGGAACCAGCATCGCCTCCCTTCCACTCCTCGCCGTCACCATCCATGTCTCCAACGCCTCCATCACCTCCCGTCATCCCGCCAGTGTCGTCCTCGCCGTCGCCGGAAACGTTACTCGTTCCGGATTCGCCGCTGCCACCATCTTCAGTTGTACCACTTCCTCTGACGCTGCCGTTGTTTCCGTCTCCGTCTCCGGCAACTCTGCCACCGCCATTTCCACCGCTTGCCGTTACAGCGTCGCCTCCAACTCCAACCGCCGCATCTCAACCACCGCCATTTCCATTTGCCGCAGCGCCTGCAACAATAACATTTCCACCGTTTGAAGTTACAGCATCGCCTCCAACTCCCACAGAGACGGAGACTATTCCTCCACCGTCTGTACCTACTGCATTCACAGAACCTACGTTGGCACCGGAAGTGACATCGGCATCAACCTCTTCAAATGGAAATTTGCCGGTGGCTGTGGAAGTTCAGAAGGTTTCAAGATTGCACGTGCCAAGTGGACTGACAGTTGGGCTTGTAGTTGGAGCAATCGTTCTCGTGTTTGTTTTTGCTGTTGGATCAGTTCTATGCAGGAATAGGAAGAAAAACAAACACAAGAATCTCCCCACCCATCACTGTAACAAATCATCACCCTATGTTGGATCCAACGGGTCTCATGTTATTGGAGTGCCATCAAATCCAACGCTGCCACCACATCTCACCAAGGGCGGTGGAGCTTCTGGCTCTTTTAATTCGGTGTCCGTGAAAGCAATTTCAAACCATACTCCAAGGGGTGCCTTTGGACCCGTGAATGGTATTTTAACATATGATGAATTATTAGTGGCCACTAATTATTTCTCCGAGTCCAACCTTCTTGGAGAAGGAGGTTTTGGCTATGTGTATAAAGGAGTTCTCCCATGTGGAAAGGAAATTGCAGTTAAGCAGTTAAAAACAGGAAGCCAACAAGGAGAGCGAGAGTTTCAAGCTGAGGTTGAGACCATTAGCCGAGTGCATCATAAACATCTTGTTCAATTGGTTGGATACTGCGTTACCGGGGCAGAAAGATTGCTTGTTTACGAATTTGTTCCAAATCACACATTGGAATTCCACTTACATGGTAATCCGGCAATTATTCATCGTGATATTAAAGCATCTAATATTCTTCTTGATTTTAAGTTTGAACCCAAGGTTTCTGACTTTGGCCTGGCAAAAATCTTCCCTAACACCGATAGTTGCATTAGTCACCTCACCACCCGAGTGATGGGAACTTTTGGATATCTGGCTCCGGAGTATGCATCAAGTGGTAAAGTGACAGATAAATCAGATGTATACTCTTACGGGGTCATGCTTCTAGAACTTATAACTGGACGTCCACCAATCACTGCAACAGGATCAAGGAATGAGAGCCTCGTTGACTGGGCTAGGCCATTGCTTGCTCAAGCACTACAAGATGGTGACTTCGACAATCTTGTTGATCCAAGATTGCAGAAAAACTACGAAGATGATGAGATGGTTAGAATGATTACTTGTGCAGCTGCTTGTGTGCGCCATTCAGCCAGGCTTCGACCTCGTATGAGCCAAATAGTTGGAGCCTTAGAGGGAGTGGTTTCTCTAACCGATCTTGTTGGAGATATTACACCGGGGCATACCACAATATACAATTGGTCAAATAGTTCAAATTATGATGCCAACCAATACCAGCAGGACATAAGAAATTTTAATTTGGCATTATCATGTCAGAAATACAGCTCCAGCAGGTATAGTGAAACCACTAGTGCTTATGATCTTCACTCATCAAGCTCAAGTGGTGAGGCTCAGGAATCAATCCAAGACATGATGTGGAATGTGTTGTGA 1911 0.4731 MFAVAPYSPASTPPLPPFDITPPPLPEPASPPFHSSPSPSMSPTPPSPPVIPPVSSSPSPETLLVPDSPLPPSSVVPLPLTLPLFPSPSPATLPPPFPPLAVTASPPTPTAASQPPPFPFAAAPATITFPPFEVTASPPTPTETETIPPPSVPTAFTEPTLAPEVTSASTSSNGNLPVAVEVQKVSRLHVPSGLTVGLVVGAIVLVFVFAVGSVLCRNRKKNKHKNLPTHHCNKSSPYVGSNGSHVIGVPSNPTLPPHLTKGGGASGSFNSVSVKAISNHTPRGAFGPVNGILTYDELLVATNYFSESNLLGEGGFGYVYKGVLPCGKEIAVKQLKTGSQQGEREFQAEVETISRVHHKHLVQLVGYCVTGAERLLVYEFVPNHTLEFHLHGNPAIIHRDIKASNILLDFKFEPKVSDFGLAKIFPNTDSCISHLTTRVMGTFGYLAPEYASSGKVTDKSDVYSYGVMLLELITGRPPITATGSRNESLVDWARPLLAQALQDGDFDNLVDPRLQKNYEDDEMVRMITCAAACVRHSARLRPRMSQIVGALEGVVSLTDLVGDITPGHTTIYNWSNSSNYDANQYQQDIRNFNLALSCQKYSSSRYSETTSAYDLHSSSSSGEAQESIQDMMWNVL 636
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr16508g00004 636 Gene3D Phosphorylase Kinase; domain 1 272 380 - -
Mupr16508g00004 636 FunFam proline-rich receptor-like protein kinase PERK8 384 566 - -
Mupr16508g00004 636 FunFam Proline-rich receptor-like protein kinase PERK8 277 380 - -
Mupr16508g00004 636 Pfam Protein kinase domain 389 502 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr16508g00004 636 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 393 594 IPR047117 -
Mupr16508g00004 636 SUPERFAMILY Protein kinase-like (PK-like) 289 551 IPR011009 -
Mupr16508g00004 636 SMART serkin_6 305 524 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr16508g00004 636 ProSiteProfiles Protein kinase domain profile. 305 539 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr16508g00004 636 ProSitePatterns Serine/Threonine protein kinases active-site signature. 396 408 IPR008271 GO:0004672|GO:0006468
Mupr16508g00004 636 MobiDBLite consensus disorder prediction 9 56 - -
Mupr16508g00004 636 MobiDBLite consensus disorder prediction 1 72 - -
Mupr16508g00004 636 ProSitePatterns Protein kinases ATP-binding region signature. 311 333 IPR017441 GO:0005524
Mupr16508g00004 636 PRINTS Proline rich extensin signature 2 23 - -
Mupr16508g00004 636 PRINTS Proline rich extensin signature 79 104 - -
Mupr16508g00004 636 PRINTS Proline rich extensin signature 45 62 - -
Mupr16508g00004 636 PRINTS Proline rich extensin signature 24 40 - -
Mupr16508g00004 636 Gene3D Transferase(Phosphotransferase) domain 1 386 560 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr16508g00004 Mupr-Chr16508 35969 40589 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr16508g00004 216 626 Trihelix Transcription Factor Family AT4G32710 53.007 4.52e-127 390
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Mupr16508g00004 Pkinase 2.2e-24 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr16508g00004 - - gmx:100810262 780.4