Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr1649g00002 ACTTCGCCACCTGCAACAGCACAACCACCTTTGAAAAATAGTAGTGGATCTGCACGTAAAATGTTGCTGGAATTTATTGCTGGCATTTTAACAACATTGGTAGTGGCCTTACTCTATTGGCTCTTAAGGAGAAAGGTCATTCCATTTCTTAAGCAACGCAAGACTTTGAAAGGAAAGGAGCATAAAAGCTTGAAATATGAGAAAATATCATTAAGGCATTTTGATTTTAAGGAACTAGAGAGAGCTACCAAAAATTTTAGCCAAGATTGCTTGCTGGGTTCTGGTGCATTTGGAAATGTCTACAAAGGAACCTTTGACTTAGAAGGAACACTAGCCATCAAGAGAGCTCATTCTGAATCATTCTTAAGTGTGGAAGAATTCAGAAATGAAGTTAGGCTCCTTTCAGCTGTAAGGCACGGGAATCTTGTTGGTCTGGTTGGATATTGTGAAGAACCAGAACGAGATGGAGCCAAAATTCTAGTCTATGAATATGTTCCAAATGGTTCACTACTTGAGTACATCATGGGAAACAGAATGAGCTTAACTTGGGAGCAAAGAGTAAACATAGCAATAGGAGCAGCAAAAGGCATAGCTTATTTGCATGAAAGGGTGAAACCAAGCATAATTCACCGTGACATCAAACCAAGTAACATCCTATTAGGGGAAGGTTTTGAGGCTAAGGTTTCAGATTTTGGGCTGGTAAAATCAGGGCCTACTGGTGATCAGTCACATGTGAGCAGCCAGATTAAAGGGACACCGGGGTACCTTGATCCTGCCTATTGTTCAAGCTTCCATTTGAGTAAATTCAGTGACGTTTATAGCTTTGGTGTCATACTTTTGCAACTTGTTTCGGCTAGACCTGTGGTGGATTCCACTGAAAAACAAAGTAATCAACATATTATAGACTGGGCAAGGCCATGCTTAGAGAAGGGTAGTGTTGAAGAAATCATGGATGCAAATCTACTATGTCAAAGTGAGCCATGCAACATGGAAGTTATGCTAAAGATGGGACAACTTGCTTTAAGATGTGTGGTTGAAGAACCAAAACATCGCCCTACAATGACCCAGGTGTGTCAAGAACTAGAGCAAGCCCTCCACTCAGCTGATAGCTTCAAAAACAAGCAGTCTTCAAAGGGATTCGTTAGACCAATTGAACCATACGATTGTTCACAAAGCTTTGTTAGTTTAGACGGTGTTGGATTTCAGAAATTCCATGTTGATATGGATAGCTTCTCCTTTAAGAGCACAGGCTTAAGGTGCCTAGAAAATAATAGTATTAGTATTGACATAGATAAAAAATAA 1302 0.4002 TSPPATAQPPLKNSSGSARKMLLEFIAGILTTLVVALLYWLLRRKVIPFLKQRKTLKGKEHKSLKYEKISLRHFDFKELERATKNFSQDCLLGSGAFGNVYKGTFDLEGTLAIKRAHSESFLSVEEFRNEVRLLSAVRHGNLVGLVGYCEEPERDGAKILVYEYVPNGSLLEYIMGNRMSLTWEQRVNIAIGAAKGIAYLHERVKPSIIHRDIKPSNILLGEGFEAKVSDFGLVKSGPTGDQSHVSSQIKGTPGYLDPAYCSSFHLSKFSDVYSFGVILLQLVSARPVVDSTEKQSNQHIIDWARPCLEKGSVEEIMDANLLCQSEPCNMEVMLKMGQLALRCVVEEPKHRPTMTQVCQELEQALHSADSFKNKQSSKGFVRPIEPYDCSQSFVSLDGVGFQKFHVDMDSFSFKSTGLRCLENNSISIDIDKK 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr1649g00002 433 ProSitePatterns Protein kinases ATP-binding region signature. 92 114 IPR017441 GO:0005524
Mupr1649g00002 433 ProSitePatterns Serine/Threonine protein kinases active-site signature. 208 220 IPR008271 GO:0004672|GO:0006468
Mupr1649g00002 433 CDD STKc_IRAK 92 363 - -
Mupr1649g00002 433 SMART serkin_6 86 365 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr1649g00002 433 SUPERFAMILY Protein kinase-like (PK-like) 65 362 IPR011009 -
Mupr1649g00002 433 Gene3D Transferase(Phosphotransferase) domain 1 165 383 - -
Mupr1649g00002 433 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 14 381 - -
Mupr1649g00002 433 Gene3D Phosphorylase Kinase; domain 1 49 164 - -
Mupr1649g00002 433 ProSiteProfiles Protein kinase domain profile. 86 365 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr1649g00002 433 FunFam probable LRR receptor-like serine/threonine-protein kinase RKF3 165 368 - -
Mupr1649g00002 433 FunFam Putative LRR receptor-like serine/threonine-protein kinase 51 164 - -
Mupr1649g00002 433 Pfam Protein tyrosine and serine/threonine kinase 91 361 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr1649g00002 Mupr-Chr1649 11064 13688 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr1649g00002 72 370 Receptor kinase-like Gene Family AT3G51550 44.850 1.85e-76 253
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Mupr1649g00002 PK_Tyr_Ser-Thr 1.1e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr1649g00002 - - var:108328541 740.725