Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr16496g00001 ATACCTGTTCTAGAACACTTAAACTTCTCCATAGAAGCAAATCAAGTCATTGCCATTGTTGGTCTGAGTGGAAGTGGAAAGAGCACATTGCTCAACCTTTTACTTCGTCTCTATGAGCCTAGTAGCGGTCAGATATATATTGATGGGTTCCCTCTTAAAGAGTTGGACATCAGGTGGCTGAGGCAGAACATTGGATATGTTGCACAGGAACCCCATCTCTTTCACATGGACATCAAGTCAAACATAAAGTATGGTTGCCCTAGGAACATAAAACAAGAAGATATTGAATGGGCAGCAAAGAGGGCCTATGCCCATGACTTTATTTCTTCACTTCCTAATGGATATGAAACCCTTGTTGATGACAATGCACTCAGTGGTGGACAAAAGCAGCGAATTGCCATCGCCAGAGCCATTCTTAGGGACCCAGTTATTATGATACTTGACGAAGCAACCAGTGCTCTAGATTCTGAGAGTGAGCGTTATATCAAGGAGGTGCTCTATGCATTAAAAGATGAATCTAAAACAAGAACCATCATAATCATAGCACATAGGCTTTCTACCATAAAAGCTGCTGATAAGATCTTTGTTATGGATAATGGTCGCATCATTGAGGTGGGAGACCATGAAGAGCTTCTACTCAAGGATGGACTCTATGCAAAATTAAATAAAATTCAAGCAGATATTTTTTACTTGATTTGA 699 0.4034 IPVLEHLNFSIEANQVIAIVGLSGSGKSTLLNLLLRLYEPSSGQIYIDGFPLKELDIRWLRQNIGYVAQEPHLFHMDIKSNIKYGCPRNIKQEDIEWAAKRAYAHDFISSLPNGYETLVDDNALSGGQKQRIAIARAILRDPVIMILDEATSALDSESERYIKEVLYALKDESKTRTIIIIAHRLSTIKAADKIFVMDNGRIIEVGDHEELLLKDGLYAKLNKIQADIFYLI 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr16496g00001 232 PANTHER ABC TRANSPORTER B FAMILY 2 223 IPR039421 -
Mupr16496g00001 232 Gene3D - 2 225 IPR027417 -
Mupr16496g00001 232 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1 224 IPR003439 GO:0005524
Mupr16496g00001 232 ProSitePatterns ABC transporters family signature. 124 138 IPR017871 GO:0005524|GO:0016887
Mupr16496g00001 232 SMART AAA_5 13 201 IPR003593 GO:0016887
Mupr16496g00001 232 Pfam ABC transporter 4 152 IPR003439 GO:0005524
Mupr16496g00001 232 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 225 IPR027417 -
Mupr16496g00001 232 FunFam Multidrug ABC transporter ATP-binding protein 1 228 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr16496g00001 Mupr-Chr16496 1608 3886 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr16496g00001 1 225 Calmodulin-binding Proteins AT2G36910 52.838 1.60e-67 223
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr16496g00001 - - vum:124820309 409.838