Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr1647g00009 ATGGGTGAAGGTGGTAAGGCAGGAACTGCAAATGACGCCATAGCATATCTGAAGGCAGCGAAGGATGTATTTTATGATAAGAGGGAAAAGTATGATTACTTTTTGAATTTCATGAAGGATTTCAGAGAGCAAAGAATTGATACTGAGGGTGTGATAGCAGGAGTGAAGATGTTGTTTAAAGAGCACACTGATTTAATTTCGGGATTTAACACCTTCTTGCCAGATAAATATAAAATCAAAATTCCATTGGAGGACGAAAATCCCTTTCAGAGGATGCATGGTGGATACGAAGAAGCTACAAATTTTGTGAAAAAG 315 0.3778 MGEGGKAGTANDAIAYLKAAKDVFYDKREKYDYFLNFMKDFREQRIDTEGVIAGVKMLFKEHTDLISGFNTFLPDKYKIKIPLEDENPFQRMHGGYEEATNFVKK 105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr1647g00009 105 PANTHER SIN3B-RELATED 9 105 IPR039774 GO:0003714
Mupr1647g00009 105 SUPERFAMILY PAH2 domain 9 75 IPR036600 GO:0006355
Mupr1647g00009 105 FunFam Paired amphipathic helix protein Sin3 12 74 - -
Mupr1647g00009 105 Gene3D Paired amphipathic helix 12 74 IPR036600 GO:0006355
Mupr1647g00009 105 Pfam Paired amphipathic helix repeat 29 73 IPR003822 GO:0006355
Mupr1647g00009 105 ProSiteProfiles PAH domain profile. 6 76 IPR003822 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr1647g00009 Mupr-Chr1647 24658 25118 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr1647g00009 4 97 WRKY Transcription Factor Family AT4G12020 49.495 4.73e-22 87.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Mupr1647g00009 PAH 1e-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr1647g00009 K11644 - pop:7460792 134.42