Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr16474g00001 ATGGACCAACCCCAACTCTTACATGATCAAAGCTTCCCACTCTTCAAAACCCCTCGCAAACCCCCCCACAATCCCCCCTTCCCCGCCGCAACCACCGCAAACCCTACCTCCGCCGCCGAGAGCCGCGAAAACCCGGACCCCGAGACCTTCGCCGACCTCGGCCTGGCGGAATGGGCGGTGAAGACGTGCCGGGAGCTCGGAATGCGAAAGCCGAGGGGCGTGCAGCGGCGGTGCATCCCGAGGGTCCTGGAGGGCCGCCACGTGCTCGGCATCGACGAGACTGGGAGCGGGAAGACAGCCGCCTTCGCCCTCCCGATCCTGCATCGCCTTGCCGAGCACCCGTTCGGTGTGTTCGCCCTTGTCGTGACGCCCACGCGCGAGCTCGCATTCCAGCTCGCCGAGCAGTTCCGGGCCCTGGGCTCCGCTGTGCACCTCCGCATTGCGGTGGTGGTCGGCGGCATGGACATGCTCAAGCAGGCGAAGGAATTGGTCGCAAGGCCGCACCTCGTCATCGCTACCCCCGGGAGGATCCACTTCTTGCTCCGCGATAACCCTGACATTCCACCTGTTTTCTCCAGAACTAAGTTCCTTGTCTTGGATGAAGCAGATCGAATCCTGGATGTTGGCTTTCAGGAGGAATTGAAATTTATCTTTCAGTGCTTACCAGAAAGTCGACAAAACCTGTTCTTTTCTGCGACAACTACAAGTAATCTGCAAAAGTTGCGCGAACGTTACCAAGATAAGATGTATGTCTATGAGGCATATGAAGGCTTTAAAACAGTTGAAACACTTAAGCAACAGGTTATATTCATCCCTAAAAAGGTTAAGGATGTGTATTTGATGCACATTTTGTCTAAAATGGAGGATATGGCCATTCGCTCTGCAATCGTATTTATCTCAACATGC 906 0.5563 MDQPQLLHDQSFPLFKTPRKPPHNPPFPAATTANPTSAAESRENPDPETFADLGLAEWAVKTCRELGMRKPRGVQRRCIPRVLEGRHVLGIDETGSGKTAAFALPILHRLAEHPFGVFALVVTPTRELAFQLAEQFRALGSAVHLRIAVVVGGMDMLKQAKELVARPHLVIATPGRIHFLLRDNPDIPPVFSRTKFLVLDEADRILDVGFQEELKFIFQCLPESRQNLFFSATTTSNLQKLRERYQDKMYVYEAYEGFKTVETLKQQVIFIPKKVKDVYLMHILSKMEDMAIRSAIVFISTC 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr16474g00001 302 Gene3D - 27 252 IPR027417 -
Mupr16474g00001 302 PANTHER ATP-DEPENDENT RNA HELICASE RHLE-RELATED 38 301 - -
Mupr16474g00001 302 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 79 252 IPR014001 -
Mupr16474g00001 302 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 48 76 IPR014014 GO:0003724
Mupr16474g00001 302 CDD DEADc_DDX49 50 253 - -
Mupr16474g00001 302 MobiDBLite consensus disorder prediction 1 48 - -
Mupr16474g00001 302 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 43 248 IPR027417 -
Mupr16474g00001 302 ProSitePatterns DEAD-box subfamily ATP-dependent helicases signature. 198 206 IPR000629 -
Mupr16474g00001 302 SMART ultradead3 67 267 IPR014001 -
Mupr16474g00001 302 Pfam DEAD/DEAH box helicase 74 241 IPR011545 GO:0003676|GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr16474g00001 Mupr-Chr16474 1063 3593 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr16474g00001 48 301 Eukaryotic Initiation Factors Gene Family AT3G13920 31.154 3.05e-29 113
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr16474g00001 K14778 - gmx:100804060 508.834