Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr16471g00001 ATGAGAGAAAAAGTATATTATTCGAGTGAAAGAAAAATTAAGAAGCGAGGACTTAGTGGTAATTTCACCATCTCAGCGCCATTAGAAAGCAAACAGAATATAGCAAACGACGCCGTTGGATCGCGCTTCAAAACCCCCCAAACACACTCTCTACGAACAAATCAAGCATTCCATAGTTCAGCTAGGGCACGCCTCTCTCTAGCGGCCTCTTCTCTCCCTCGCGCCGCCACAGAAAAGGTTTTTGATGTGGTTTTTACGGTGTTATTGGCCTATTATTGTTTGAAGATGGCTGATGGTCATGAGACTGATAAGAACATTGAGGTGTGGAAAATCAAGAAATTGATCAAGGCTCTTGAGGCTGCTAGAGGAAATGGGACAAGTATGATTTCCCTTATCATGCCTCCGCGTGATCAAATATCTCGTGTCACCAAGATGCTTGGTGATGAGTTTGGAACTGCATCAAACATCAAAAGCAGGGTGAATCGACAGTCAGTGCTTGGTGCAATCACTTCTGCTCAGCAGAGGCTTAAGCTCTATAACAAGGTTCCTCCAAATGGGCTTGTTCTGTATACTGGCACAATTGTGACTGAAGATGGGAAGGAAAAGAAGGTGACTATTGATTTTGAGCCTTTCAGACCTATTAATGCGTCTCTATATCTCTGTGACAATAAGTTTCATACTGAAGCTTTAAATGAGCTTCTGGAGTCTGATGATAAATTTGGATTTATTGTCATGGATGGCAATGGTACCTTGTTTGGGACCTTGAGTGGTAATACAAGAGAGGTGCTTCATAAATTCAGTGTGGATCTCCCAAAGAAACATGGAAGAGGAGGGCAATCAGCTCTACGTTTTGCCCGTCTTCGCATGGAGAAACGCCATAATTATGTGAGGAAGACGGCAGAGCTTGCTACCCAATTCTATATCAATCCTGCCACCAGCCAACCCAATGTATCTGGATTAATACTGGCTGGTTCAGCTGATTTCAAAACTGAGCTTAGTCAGTCAGATATGTTTGATCCTCGACTTCAAGCAAAAATACTTAATGTTGTTGATGTCTCCTATGGAGGGGAGAATGGGTTCAATCAGGCTATTGAACTATCTGCTGAAATTCTGTCCAATGTGAAGTTTATCCAGGAGAAGCGATTGATTGGAAAATACTTTGAGGAAATCAGCCAGGATACTGGAAAGTATGTTTTTGGGGTTGATGATACTCTAAAAGCTTTGGAGATGGGAGCTGTTGAGACACTTATTGTCTGGGAAAATCTGGATATGAATAGGTATGTCTTGAAAAATAGTGCTACTGGTGAGATTGTCATTAAGCACTATAACAAGGAACAGGAGGCCAACCAAAGCAATTTTCGAGATCCTGTGAGCTCTGCTGATTTTGAGGTTCAGGAAAAGTTGTCTCTGCTGGAGTGGTTTGCAAATGAATACAAACGATTTGGTTGCACTCTTGAGTTTGTCACCAATAAATCACAAGAAGGTTCACAGTTTTGCAGAGGTTTTGGTGGGATAGGTGGGATCTTGCGCTACCAGCTTGATATGCGATCATTTGATGATTTATCTGACAACGGAGACGATTATGATGATTCTGAATAG 1599 0.4203 MREKVYYSSERKIKKRGLSGNFTISAPLESKQNIANDAVGSRFKTPQTHSLRTNQAFHSSARARLSLAASSLPRAATEKVFDVVFTVLLAYYCLKMADGHETDKNIEVWKIKKLIKALEAARGNGTSMISLIMPPRDQISRVTKMLGDEFGTASNIKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTIVTEDGKEKKVTIDFEPFRPINASLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFSVDLPKKHGRGGQSALRFARLRMEKRHNYVRKTAELATQFYINPATSQPNVSGLILAGSADFKTELSQSDMFDPRLQAKILNVVDVSYGGENGFNQAIELSAEILSNVKFIQEKRLIGKYFEEISQDTGKYVFGVDDTLKALEMGAVETLIVWENLDMNRYVLKNSATGEIVIKHYNKEQEANQSNFRDPVSSADFEVQEKLSLLEWFANEYKRFGCTLEFVTNKSQEGSQFCRGFGGIGGILRYQLDMRSFDDLSDNGDDYDDSE 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr16471g00001 532 FunFam Eukaryotic peptide chain release factor subunit 1 231 372 - -
Mupr16471g00001 532 Gene3D eRF1 domain 1 92 230 IPR024049 -
Mupr16471g00001 532 NCBIfam peptide chain release factor aRF-1 108 512 IPR004403 GO:0003747|GO:0006415
Mupr16471g00001 532 SMART eRF1_1_2 99 235 IPR005140 -
Mupr16471g00001 532 PANTHER PEPTIDE CHAIN RELEASE FACTOR SUBUNIT 1 99 524 IPR004403 GO:0003747|GO:0006415
Mupr16471g00001 532 Gene3D - 374 531 IPR029064 -
Mupr16471g00001 532 SUPERFAMILY N-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1 101 235 IPR024049 -
Mupr16471g00001 532 Gene3D eRF1 domain 2 231 372 IPR042226 -
Mupr16471g00001 532 FunFam Peptide chain release factor subunit 1 374 532 - -
Mupr16471g00001 532 Pfam eRF1 domain 1 113 233 IPR005140 -
Mupr16471g00001 532 SUPERFAMILY Translational machinery components 237 371 - -
Mupr16471g00001 532 Pfam eRF1 domain 2 239 372 IPR005141 -
Mupr16471g00001 532 SUPERFAMILY L30e-like 373 515 IPR029064 -
Mupr16471g00001 532 Pfam eRF1 domain 3 376 513 IPR005142 -
Mupr16471g00001 532 FunFam Eukaryotic peptide chain release factor subunit 1 97 230 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr16471g00001 Mupr-Chr16471 2669 5132 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr16471g00001 96 532 Eukaryotic Initiation Factors Gene Family AT3G26618 89.931 0.0 819
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr16471g00001 K03265 - gmx:100785916 814.683