Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr16462g00001 ATGAGCATGTTAGGACTGAGAGACCTAGTTCTAATAGCCCCAACCCCTTCCCTGCACCAAGGGCAACCCATTTCAGAAAACCACACTCCCAACCTTCCCTTGCCTTCTTCAGCTGCTCTCAGTGTTGGATTTGGCATTTTCCCTCTCCTAACTGCCACGCCGTGCGTGACAACGCACCCTCAGCAAAACAATGAGGTTCAGGACTGTGGTGGCGGTGCCGCCACCACCAACTATTGGAACCTCAAGATGTGTCCCCAAGTGAACCCTACCAAGAAGGGTGTGATCAACGTCGATGATAATGACAAGGGCCTCATGGATACTGAGGAAAACGGGGTTTATGGTCCTGACTTTAGGGTGTGCCAAGACTGTGGCAACAGGGCCAAGAAAGATTGCGTTTTTAGAAGATGCAGGACTTGTTGTAAGGGACGTGGATATGATTGCAGCACTCACGTGAAGAGCACGTGGGTTCCCTCACTTCGCCGCCGGGAGCGTGACATGACGGTGGCTGTCGCTACCGGCACTGCTAAGAGGCCAAGAGCTTTAGTGGGGTCATCACAAAATGCCACTGCCACTTCTCATAGTTCCAACTCTAATGCTACTACAACACCTAAGAGCCTAGCCACTAGCTCTTCTCACCAAGGTGCTCTTTCTTTCTCGTTTTCGACTCCTCCAATGATGTCGTTTGATCCATATGCTAGCTTCAAGCACTCTTTACCGGGTCATGTTCGTGCGCCTGCAGTGTTCAAGTGCCATAGAGTCTCTGCCATTGGGAATGGTGAAGATGAATTTGCTTATTCAGCCACCGTCCATATTAGTGGCCATGTGTTCAAGGGGTTTCTCTATGATCATGGCGTTGATGGGAAAATTACAAATGCAGTGCCTTGTGTTTCGGAACTGCAACTGGGAAACAATTGCAATGGGAAGAACAGGGAATGTTCTTCTGCAATTGGGCTTCCAACCAACAATGCTTACCCTGCTTCTGCCACTTGA 990 0.498 MSMLGLRDLVLIAPTPSLHQGQPISENHTPNLPLPSSAALSVGFGIFPLLTATPCVTTHPQQNNEVQDCGGGAATTNYWNLKMCPQVNPTKKGVINVDDNDKGLMDTEENGVYGPDFRVCQDCGNRAKKDCVFRRCRTCCKGRGYDCSTHVKSTWVPSLRRRERDMTVAVATGTAKRPRALVGSSQNATATSHSSNSNATTTPKSLATSSSHQGALSFSFSTPPMMSFDPYASFKHSLPGHVRAPAVFKCHRVSAIGNGEDEFAYSATVHISGHVFKGFLYDHGVDGKITNAVPCVSELQLGNNCNGKNRECSSAIGLPTNNAYPASAT 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr16462g00001 329 MobiDBLite consensus disorder prediction 172 208 - -
Mupr16462g00001 329 PANTHER PROTEIN LATERAL ROOT PRIMORDIUM 1 84 314 IPR007818 GO:0003700|GO:0006355
Mupr16462g00001 329 MobiDBLite consensus disorder prediction 179 208 - -
Mupr16462g00001 329 Pfam Domain of unknown function (DUF702) 119 286 - -
Mupr16462g00001 329 NCBIfam putative zinc finger domain, LRP1 type 119 161 IPR006510 -
Mupr16462g00001 329 NCBIfam LRP1 C-terminal domain 238 285 IPR006511 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr16462g00001 Mupr-Chr16462 767 1961 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr16462g00001 1 324 C2H2 Transcription Factor Family AT5G12330 40.230 4.00e-56 186
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SRS Mupr16462g00001 DUF702 1.6e-55 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr16462g00001 - - vun:114175485 524.628