Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr1644g00003 ATGGCCGGTATTTCAGCAGCTGATGTGGACATGGCCAATAAGTATTGTCCACGTGTACCTCATCATTGGACGCGTGATGAGGATGAAAAGCTCCGTCAACTTGTTCAACAACATGGTCCCCGTAAATGGAATTCAATTGCTAGCAAAATTGAAGGAAGATCAGAGAGAAGCTGCAGAATAAGGTGGGTCAAACATCTTGATCCTAAAGTTAACAAAAGTCCATTTACAGATGAGGAGGAAGAGAGGCTACTTGCGGCTCACGAGCTTTATGGAACAAGGTGGTCGACCATAGCCAAGCTCTTCCCTGGTCGAACCGATAACGCCGTGAGGAATCATTGGTTCATTGCAAAGGAGCGAAAGCGAAGGAATGACTCAAACAATTCCTCCTCTAGTAACAGTCTTCCCCATGCACAACCTCATGAACCGTTGTTTGGGTCGAGAAATGTGTTAGAAAGGTCTTCTTCTTCTTCTTCTTTAGAAAAAATGTCAAAGGATAGTGGACAGAAAGATATTCCTTTATATGATTTTCTTGGTGTCGGTGTATCAGATGATGGCCACTAA 561 0.4367 MAGISAADVDMANKYCPRVPHHWTRDEDEKLRQLVQQHGPRKWNSIASKIEGRSERSCRIRWVKHLDPKVNKSPFTDEEEERLLAAHELYGTRWSTIAKLFPGRTDNAVRNHWFIAKERKRRNDSNNSSSSNSLPHAQPHEPLFGSRNVLERSSSSSSLEKMSKDSGQKDIPLYDFLGVGVSDDGH 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr1644g00003 186 ProSiteProfiles Myb-like domain profile. 23 66 IPR001005 -
Mupr1644g00003 186 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 67 121 IPR017930 -
Mupr1644g00003 186 CDD SANT 74 113 IPR001005 -
Mupr1644g00003 186 Gene3D - 73 141 - -
Mupr1644g00003 186 FunFam Transcriptional activator Myb isoform A 21 72 - -
Mupr1644g00003 186 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 23 66 IPR017930 -
Mupr1644g00003 186 Pfam Myb-like DNA-binding domain 23 83 - -
Mupr1644g00003 186 MobiDBLite consensus disorder prediction 119 171 - -
Mupr1644g00003 186 ProSiteProfiles Myb-like domain profile. 67 113 IPR001005 -
Mupr1644g00003 186 PANTHER MYB PROTEIN-RELATED 22 137 - -
Mupr1644g00003 186 CDD SANT 23 66 IPR001005 -
Mupr1644g00003 186 MobiDBLite consensus disorder prediction 148 162 - -
Mupr1644g00003 186 Gene3D - 21 71 - -
Mupr1644g00003 186 SUPERFAMILY Homeodomain-like 18 113 IPR009057 -
Mupr1644g00003 186 SMART sant 19 68 IPR001005 -
Mupr1644g00003 186 SMART sant 71 119 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr1644g00003 Mupr-Chr1644 23606 25106 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr1644g00003 22 125 MYB Transcription Factor Family AT1G17950 60.577 8.82e-45 147
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mupr1644g00003 Myb_DNA-bind_6 3.9e-19 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr1644g00003 K09422 - gmx:102660725 154.836