Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr1644g00002 ATGGCCAATTCTTCGAAGACAGCTTCTGATAACATAGCGAATAAGTCTCGTTCTCGTGTCCATCACTGGAAGGAAGCTGAGGATGAAAAGCTTCGCCAACTTGTTCGAGAACATGGTCCCCAAAACTGGAACTCAATTGCTGAGCATCTAGAAGGAAGAGCGGGGAAAAGCTGCAGATTACGGTGGTTCAATCATCTAGACCCTAGACTGAATAGAAATCCATTTACGAAAGAAGAAGAAGAGAGACTACTTGCAGCTCGCGACCTTTATGGGAACAGGTGGTCACTCATATCGAATCTCTTTCCAGGAAGAACCGACAATGCGGTGAAGAATCATTGGCATGTTACAATGGCGCGAAAGAGGAAGCAGGAATCCAGGAGGAGAAGCTTCCAAGGATCCAACACCAACAGTAACAGTATTCCCCTTAATGCTGCACTTGCACAGCCTCATGAACCTTTTTTTGGCCCCAGAAATGGGTTACTGCACACAATGCGTCCCAATGGTTTTTTCAACTTTGCGAATTTTGGGTCGAAGCCATCCTTTTCGGACACTTTTCCCATTATGAACTCAATTGTGAATCATCACTTGGGATTACTTAATGGTGCTGGTGATGGAAGGGTGAAAGGGAACTTTAGTAGTTTGTTTGAGAACGCAGAATCCGCAATGAAGGAGTTGGGAGCTTCTTCTTCGTCAGGGCAAGAGCAAGAGCAAGCACTTGAGGAGTCAAATGGTAGTGGACGGAATGAGGTTCCTTTCTATGATTTTTTTGGGGTCGGTGACTCTCATGACCTGCCCTTGGAGCAGCAAGCATATCTCCGTCAGTGGTCGCATCTCACTTTGCTTAACTTCGTCCTATCTTGCTTACCCTACGTGCACCTTCTTTCTCTCTCTACAAAACTCCAAAAATGGTCATCATTTTACTTAAACAAATTCAAAGGAGTTTCTTGCCAAGTAGGGGAGAGAGTAGGCGAAAAGTTGCTTAGGAATCTTGGGAAACACTTTGTAAACCCAAAGGGGACTAAGTGTCAAATTATTAGAACGAGTTGA 1047 0.447 MANSSKTASDNIANKSRSRVHHWKEAEDEKLRQLVREHGPQNWNSIAEHLEGRAGKSCRLRWFNHLDPRLNRNPFTKEEEERLLAARDLYGNRWSLISNLFPGRTDNAVKNHWHVTMARKRKQESRRRSFQGSNTNSNSIPLNAALAQPHEPFFGPRNGLLHTMRPNGFFNFANFGSKPSFSDTFPIMNSIVNHHLGLLNGAGDGRVKGNFSSLFENAESAMKELGASSSSGQEQEQALEESNGSGRNEVPFYDFFGVGDSHDLPLEQQAYLRQWSHLTLLNFVLSCLPYVHLLSLSTKLQKWSSFYLNKFKGVSCQVGERVGEKLLRNLGKHFVNPKGTKCQIIRTS 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr1644g00002 348 MobiDBLite consensus disorder prediction 119 141 - -
Mupr1644g00002 348 PANTHER MYB PROTEIN-RELATED 22 139 - -
Mupr1644g00002 348 ProSiteProfiles Myb-like domain profile. 67 117 IPR001005 -
Mupr1644g00002 348 Gene3D - 73 140 - -
Mupr1644g00002 348 MobiDBLite consensus disorder prediction 225 246 - -
Mupr1644g00002 348 Gene3D - 21 71 - -
Mupr1644g00002 348 SMART sant 19 68 IPR001005 -
Mupr1644g00002 348 SMART sant 71 119 IPR001005 -
Mupr1644g00002 348 MobiDBLite consensus disorder prediction 225 244 - -
Mupr1644g00002 348 FunFam MYB transcription factor 21 71 - -
Mupr1644g00002 348 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 67 121 IPR017930 -
Mupr1644g00002 348 MobiDBLite consensus disorder prediction 1 24 - -
Mupr1644g00002 348 CDD SANT 23 66 IPR001005 -
Mupr1644g00002 348 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 23 66 IPR017930 -
Mupr1644g00002 348 CDD SANT 74 114 IPR001005 -
Mupr1644g00002 348 SUPERFAMILY Homeodomain-like 19 113 IPR009057 -
Mupr1644g00002 348 Pfam Myb-like DNA-binding domain 23 83 - -
Mupr1644g00002 348 ProSiteProfiles Myb-like domain profile. 15 66 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr1644g00002 Mupr-Chr1644 14110 23596 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr1644g00002 22 261 MYB Transcription Factor Family AT1G17950 41.833 2.31e-54 177
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mupr1644g00002 Myb_DNA-bind_6 1.4e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr1644g00002 K09422 - gmx:102660725 241.891